Strain | Pseudomonas aeruginosa BL05 genomic scaffold adgfv-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGACCTCATCGGCGACCACCTGCATGAGACGCTCGGCCTCGCCACCCGGCGGATATTCACGGGGAAACTCCGCCGCCCGCAGCAACAGTTCGCGCAGC AGGCCGGACACCTCCAGTACCCGGCAACCGCCGGGCAGCGAACGATCCAGGTAGAGACTGCGGAACAGCACAGGGTTGCAAGCCTCCGCGGCGTGCCGGA CGCCCGGCGGAATCCACAGCGCCCGCTGCGCCGGCACCAGATAGCTGTGCCGCTCGGTGCTGGCGCGCAAGGTGCCGCTGGCGGCGTACATCAGTTGGCC CCAGGGGTGCTCGTGCATCTCCACCCGGTGCCCGGCGGGCATCTCGAAGGCGCGCAGGTACACCGCGCAGGGCAGGCTGCGGAATCGCGGCAGGTCGCGT TCTTGTCCCGTTTGCGGCATCGGTTGTCCCCATCCGTCGAGTGAGCGGTGCGCGGCCGATGGTAGCGTGTGGCTCCCCATAGACAAACCGGAGCCACGCC
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DNA Sequence for Gene |
>Q059_02870
ATGAGCAGTCATCGCCCGCAACATCGCCTGTCCGTTCCCGATATCCAGCGCCGCAAGGGTGCCGGCAGCCTGGTGGCGCTGACCGCCTACAGCACGCCCA TGGCCCGCCTCCTCGATCCGCATGCCGACCTGCTGCTGGTCGGCGATTCGCTGGGCATGGTGCTCTATGGCATGCCCAGCACCCTGGGAGTGAGCCTGGA GATGATGGTCGCCCACACCCTGGCGGTGATGCGCGGCAGTCGGCGCGCCTGCGTGGTGGCCGACTTGCCGTTCGCCAGCTACCAGGAATCGCCCCGACAG GCGTTCCGCAACGCCGCACGCCTGCTGGCCGACAGCGGCGCCCAGGCGGTGAAGCTGGAAGGCGGTGAGGAAATGGAAGAAACCGTGGACTTCCTGGTAC GCCGTGGCATACCGGTGCTCGCCCATATCGGCCTGATGCCGCAGCAGGTCAACGCCATGGGCGGCTTCAAGGCCCAGGGGCGTGACCCGGAAAGCGCCGA ACGGGTACGCCGCGACGGCCTCGCCATGCAGCGCGGCGGCGCCTTCGCGGTGGTCATCGAAGGCGTAGGCGAGCCGCTGGCCCGTCGCCTTAGCGAAGAA CTGGCGATCCCCTGCATCGGTATCGGCGCCTCGCCGGCCTGCGACGGCCAGGTACTGGTCAGCGAGGACCTGCTCGGGCTAAGCGGCGAACAGGTACCGC GCTTCGTCGAACGCTACGCGCGCCTCGACCGGGAAATCGACGAGGCGGCCCGGCGCTTCGCCGAGGACGTGCGCGAACGGCGCTTCCCCGAGGCCAGGCA CTGCTTCGCCATGCGCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGCGGTCTCAGGCGAAGACTTCCGCCAGCAGGTCGTCCATCGCCTGGAAGGCACGCCGGGAGGTCCTGGCGTCATAGTGCATCTTGCCCGGCAGCTT GGCGTTCGGATCGGTGAAGGAATGCACCGCGCCGCCGTAGCTGGTGAGCTGCCAGTCGACGCCGGCATCGGTCATCTCCCTGGCGAAGGCCGGCAACTGC TCGCGCGGCACCAGCGGATCGGAGGCACCGTCGAGGACCAGTACCGCGCCCTTGATGTTCCTGGCATGCGCCGGGTCCGGCGTATCCAGGGTGCCATGGA AGGACACGAAGGCCTTCAGCTCGGCGCCGTCGCGAGCCAGCTCCAGCGCGCAGCAACCGCCGAAGCAGAAACCGAAGGCGGCCTGGCGGGTCGTATCGAC AGCCGCGAGCGCCTGTCCGCGCAAGGCCGCCAGCGCTGCCTGCATGCGCTTGCGCAGCAGGGCCCGGTCGTTCTTCAGCGGCATCATCGCCGCGCCCGCC
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Amino Acid Sequence |
>3-methyl-2-oxobutanoate hydroxymethyltransferase
MSSHRPQHRLSVPDIQRRKGAGSLVALTAYSTPMARLLDPHADLLLVGDSLGMVLYGMPSTLGVSLEMMVAHTLAVMRGSRRACVVADLPFASYQESPRQ AFRNAARLLADSGAQAVKLEGGEEMEETVDFLVRRGIPVLAHIGLMPQQVNAMGGFKAQGRDPESAERVRRDGLAMQRGGAFAVVIEGVGEPLARRLSEE LAIPCIGIGASPACDGQVLVSEDLLGLSGEQVPRFVERYARLDREIDEAARRFAEDVRERRFPEARHCFAMRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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