Strain | Pseudomonas aeruginosa BL05 genomic scaffold adgfv-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGACAACCTGCCCTTCCGGGCAGGTATCTGCGGAGAGATAGGGGGGGAAGTATGTAGTTGCCATTTCTGGTCCCCGGGGAGCCTCGTCGACGAGGCCCG CCATGGGCCAAGGTTTGTTGTCGGGAGGCTCTCCCGACGACGATGGAGCGTGCGAGAAGAACAATGAGAAAGACCGCCGTGAGGCCCATCGGAGAGCCGT TCTACGGTTTCCGCAAAGATCCGGGGCGCCGTCCCCTCCAGCCCAGCGCAGTTCCTGCGCGGCGCCTCGTGTCCGTGCTCATCGAGAAGTTCTCTTCAGC CTCGTTTCGTCGTCGCCCGGCGGGCGGCGAATGGGCTCGACCTCGTCCGGAACACCCGCACAGGGCCGGTGGCGATATGTACTTCCAGGTCCGGCTTGAT AAAGGGAATTGTCATGAGTGGATAAGACGGAAACAAAAAAGAATAAAAACGCTGAAGAACCGAATCCTGCCGGGATCGATTGTTGACTGGTGAAGCTGGC
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DNA Sequence for Gene |
>Q059_02554
ATGCATGATGAGAGAGAGGGATATCTCGAGATTTTGTCAAGAATAACAACCGAGGAAGAGTTCTTCTCCCTGGTTCTCGAGATATGCGGTAATTATGGAT TCGAATTCTTTTCATTCGGTGCGCGGGCGCCTTTCCCGCTGACCGCACCTAAATATCATTTCTTGTCCAATTACCCAGGGGAATGGAAAAGCAGATATAT CTCCGAAGACTACACATCCATCGACCCGATCGTGCGCCATGGTCTCCTGGAATACACCCCGCTGATCTGGAATGGCGAAGACTTCCAGGAGAACCGTTTC TTCTGGGAGGAAGCGCTGCATCACGGCATCCGTCACGGCTGGTCGATCCCGGTCCGCGGCAAGTACGGGCTGATCAGCATGCTGTCCCTGGTGCGTTCCA GCGAGAGCATCGCCGCCACGGAAATCCTGGAGAAGGAATCCTTCCTGCTCTGGATCACCAGCATGCTGCAGGCTACCTTCGGCGACCTGCTGGCGCCGCG CATCGTCCCGGAAAGCAATGTGCGCCTGACCGCCAGGGAAACCGAGATGCTCAAGTGGACCGCGGTGGGCAAGACCTACGGCGAGATCGGCCTGATCCTG TCGATCGACCAGCGCACGGTGAAGTTCCATATCGTCAATGCGATGCGCAAGCTCAACTCCAGCAACAAGGCGGAGGCCACCATGAAGGCTTACGCCATCG GCCTGCTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCGACGCCTCGTCGCCTAGCGAGGCCGCCGCGCAAGCGTCCGGCCATTCACCGAATGGCCGGATAGCGTTTGCGCCGGTCGCCTGAGCGCAGCCTTCCC ACCGGCAGCGTTTCCCCGCTGCCCCCTTCGCCATTGCGCCCGTCCTCCTGTTGTCCGGCACGCTAGTGCAACTTTCCGGGCGCTTGGCAAACCGGCCAAA GAATAGAACGGAATCGATGCCCCACACCTGTAATTTTTAAGGGGTTATGGCTATTGCAAAAAAGCGTTTATAAGTTTGTCCCCTGTCAAATCTGGTTACA ACTGGGTTTCAGGCGAAACATTCGGTCATGGCAATTCGGCATTAGTTGAAACTTTGGAGACGCTCCGAAGCGGGCAACTTTTGCCCGGAAAAAGCTTCAC GGCAATTTCTCCGGCCTGTCATCCCGATGTCTTCTTTCCGGTATGGATGCCAGTCGATTCGAACTGGCGGAGATTCGCACCATGCGAGAGTACCAACGGT
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Amino Acid Sequence |
>LuxR family transcriptional regulator
MHDEREGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRF FWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPESNVRLTARETEMLKWTAVGKTYGEIGLIL SIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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