Strain | Pseudomonas aeruginosa BL06 genomic scaffold adgfq-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTACCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCGCGG AAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGTCGC CAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCGGAA CAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCGAAG GCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGTTCGGTCAAGCGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGATGGA
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DNA Sequence for Gene |
>Q060_05512
ATGAACGCCGCGGACGAAGGCCGGATTCCCTCGCCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGC GCCAGGCCTGCGCCCAGTGGCGGCAGCGCAGCCCGCAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGC GCTGGCCCTGCCGACCCTCGGCCGCGAGCGCGGGCTGGACCGGCGGCGCGCGATCAAGCACCTCGCCCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCC ACCTGGCAGGCCGAACCGTTGCGCGACTGGCTGGCCGACCAGCGCACCGGCGTCGGCGAACAGCGCCGCCTGACCCTGCCCGACGGCAGCCTGCTGACCC TGAACACCGACAGCGCCGTGGACCTGGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCG TCCGTTCCGCGTCGCCACCGCCGAAGCGCGGCTGCATGCCGGTGCCGCCCGCTTCAACGTACGCCAGGAGATGGCCGCGACCCGGGTCGCGGTACTCGCC GGGCGGGTCGAACTGAGCCCGCTCCACGGACGCGGGCGCTGGCTGGAAAGCGGCGAGTCGATGCGCCTGGGCGCCGACGGCGAAGCGCGCCGGCTGGCCT TCGACGGCCTGCCGGACGCCTGGACCCGCGGCATGCTGATGGCCGACCGGATGCCGCTGGCCGAGGTGCTCGCCGAACTCGCCCGCTACCGTCGCGGCGT ACTGCGCTGCGACCCGCAACTGGCCAGGCTGGCGGTGTCGGGCGCCTATCCGCTGCTGGACCTGCGGCGCACGCTGGGCATGCTGCAGGCCACCTATCCG CTGAAGGTGCGCGGGGTGACCGACTACTGGATCAGCCTGGTGCCGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGCGCGGCCGCCATCCCCGTGGCAACCGCCCCCTCGCGTCCACCCCGGCAGGCCGTCCGCGGTTGCGCCGGAACAGACGTTGCCATCGACATACCGTGC TCCGCAGAAAAATAACCGCCTCGACCTGAGACCTTTTTCCTTCTCGGCTGGCAAGTAGAGGAATCCGCCCCGACCCAAGGTCCGCAGAGACCACGAGGAA CCCTGTACATGCCCGTACGCACGCTTCGCCCCCGTTCGCTGTCCCTGGCCATCCACGCCGCCGCCATGACCCTCGCCCTCGCCGGCGCGGCCCCCGCCCT GCTTGCCGCCGAGGCGCCCGCCGCCAGCTCGGCGCGCAGCTATGACATCGCCCCCGGCCCGCTCGGCCGTACCCTGTCGGCCTTCGCCAGCGACAACGGG GTATCCCTGGCGTTCGACCCGGCGCTCACCGAGGGTCGCCGCAGCGCCGCCCTGCGCGGCCGCTACGCGCCGGTCGAGGCGCTGCACCGCCTGCTGCTGG
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Amino Acid Sequence |
>membrane protein
MNAADEGRIPSPILDEAAEWLVRLQDSGCTDDTRQACAQWRQRSPQHAHAWERAERLLQCLGRLPPALALPTLGRERGLDRRRAIKHLALVLGGASLGLA TWQAEPLRDWLADQRTGVGEQRRLTLPDGSLLTLNTDSAVDLAFDASQRLVRLLRGEIFVDSRADPRPFRVATAEARLHAGAARFNVRQEMAATRVAVLA GRVELSPLHGRGRWLESGESMRLGADGEARRLAFDGLPDAWTRGMLMADRMPLAEVLAELARYRRGVLRCDPQLARLAVSGAYPLLDLRRTLGMLQATYP LKVRGVTDYWISLVPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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