Strain | Pseudomonas aeruginosa BL06 genomic scaffold adgfq-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGACCATGTTCGTCATGGCCCCGGTGTTCGACAAGATCAACAGCCAGGCCCTGCAGCCCTACCTGAACGAGCAGATTCCCGCCCAGGAAGCCCTGCAAA AGGCCGAGGTACCGCTGAAGGCGTTCATGCTGGCGCAGACTCGCACCTCCGACCTGGAGCTGTTCGTCCGCCTGTCCAAGCGCACCGACATCGGCAGCCC GGAAGCGACGCCGCTGACCATCCTGGTCCCGGCCTTCGTCACGTCCGAGCTGAAGACCGCGTTCCAGATCGGCTTCATGATCTTCATCCCGTTCCTGATC ATCGACCTGGTGGTGTCCAGCGTGCTGATGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATTTCCCTGCCGTTCAAGATCATGCTGTTCGTCCTGG TGGATGGCTGGGCGCTGATCATCGGGACGCTGGCGGGCAGTTTCGGCACCGTCTAGCGGTGCCGCCGGCTTGACGCGCCGCTGGCGCGCTGGAGAGAGAC
|
|
DNA Sequence for Gene |
>Q060_03860
ATGACCCCTGAGGTGGCACTCGACCTGTTCCGCGAGGCGTTGTGGCTGACGGCGATGATCGTCGGCGTGCTGGTGGTTCCGAGCCTGCTGGTCGGTCTCG TGGTGGCGATGTTCCAGGCCGCCACCCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGCCTGATGGTGATTCTGCTCACCCTGATCGTGCTGGGCCC CTGGCTGCTGCGGCAGCTGATGGAATACACCCAGACGCTGATCGGCAACATCCCGCTGCTGATCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGCTGGAGCTGACCAACGCGCAGATCGGCGGCTGGATCGCCAGCTTCGTGCTGCCGCTGTTCCGGGTCGCGGCGCTGCTGATGACCATGCCGGTGATCGG CACCCAGCTGGTGCCGGTACGGGTGCGACTGTACCTGGCGCTGGGCGTCTGCGTGGTGCTGGTGCCGAACCTGCCGCCGATGCCGCAGGTGGACGCGCTG AGCATGAAGGCCATGCTGCTGATCGGCGAGCAGATCCTGGTCGGCGCCTTGCTCGGCTTTTCCCTGCAGTTGCTGTTCCACGCCTTCGTGATCGCCGGGC AGATCATCTCGATGCAGATGGGCCTGGGCTTCGCTTCCATGGTTGACCCGGCCAACGGCGTCTCGGTGCCGGTGCTCGGCCAGTTCTTCACCATGCTGGT GACGCTGCTGTTCCTGGCGATGAACGGACACCTGGTAGTGTTCGAGGTAATCGCCGAGAGCTTCGTCACCCTGCCGGTGGGCGAGGGCCTGAACGGCAAC
|
|
Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVALDLFREALWLTAMIVGVLVVPSLLVGLVVAMFQAATQINEQTLSFLPRLMVILLTLIVLGPWLLRQLMEYTQTLIGNIPLLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|