Pseudomonas aeruginosa BL06, Q060_03646

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BL06 genomic scaffold adgfq-supercont1.3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTTTGCGCAGTAGTGTACAGGCCAGTATTTTCAAGGGCTGTGGCTGTTATTGGGGATATTTCTTGGTTTTCATTGTGCAACTTCTTGCACAATCGCTAT TACGCTCTAAATCAGCTGTTGGTCCGCTTGGAAGGCCTATGTTTCGAGGCTCTCCGGAGGAATCCACTGCTGCCTGCCTTATTTTTTATAAATTGTTAAC TACCTGTTTTGGTAGGGTTTTCCAAATGGCCATCAATGTCGTTATGATGGCTATAGCCAAGCCGTAAAGGGCATGGACGCAGACGCCTGACGTTTGGCTG AAAATCTTTCATTGATTCGTATCAATGAATAGGAAAATTCCCAAAGAGGGAATGTCCTGTTGCTTGCCAGTTTTTATGTTGTTTTCATGGAAAAGGCAAA GAGCTTTTCAGACTATTGGGATTTTCGTTCGGTTTTTATGCCAACTAGTTGAATTGTTAAGATATTCATTGGCGCACATGGTGTGCATTGAAGGGTTAGG
DNA Sequence for Gene
>Q060_03646
ATGACCTATTCGAGCAAGCTCTCCTCGCATTATCTGGAACTCGCGGAACAGCCGATTTCAAAGGATGTCTTTGCGGGTGAGGATGTGCGTTTTTCCAGCG AATACGAGGCGCTGGAAAATGAGCTGGGCAAGGCGCTCTCGCTCCATGAGAACGGCCAGACCGACTGGTTGAAAATCCTGGAAAACAGCGAAGCGCTGCT TCGTGCCCAATCCAAGGACCTGCGTGTTGCAGCCTGGTTGACCTGGGCCCTCTACCAACGGGAATCCTTTCCCGGTTTGCTGGCCGGACTGGGATTGCTG GAACGTCTGTGCAGCCGGCATTGGGTCGAGATCCATCCGCTCAAGGCGCGCACTCGCGCCGCGGCCATTGCCTGGCTGGTGCCCCGGTTGGAGCAGGCGC TGAACGAAAACGTACCGATCAAGGAGCAACTCCCCCTGTTCCGGCGTCTCGCCGAGCACCTGGAAAAACTCGATACCGCGCTGACCGCGCAACTGGGCGA CGACGCGCCCTTGTTGCTGCCGATCAGCCGACGCCTTTCGGGCATGCTCCAGCGCGCCGCCGACAACCAGCCCGAACCTGGCGTGGTCGGCGCCGTGGTG GCCCAGGTCAAGCAGGCGGCCAGCCAGTTGCTGGCGCCGGGTGCGCCCATCGACAACGAGCGCGACGCCCACAAGGCCATGCGCGCCCAGCAGGAGGCCG CACGCCCCCTGTGCGCCTGGTGGCTGAAGCAGAAAGCCACCGATCTGCGCGCGCTGCGCCTCAACCGAACGATGCTCTGGCTGCCCATCGAGTCCATGCC CGAGCGCAATGCCGAACAGGTCACCGCGTTAAGGGGAGTGCCGGCGGACAAGCTGAAAAGCTACCAGGAGCGTTTCGCCCAGGGCCTGTACGCCGATCTC CTGGTGGAACTGGAGGCGAGCCTGGCACGGGCGCCGTTCTGGTTCGACGGCCAGCGCCTGGTCTGGGAGTGCCTGCAAGGGCTCAACGCCGAGCAGGCGA TGCGGGAAGTCGAAATGCATTTCGCCTTGCTCCTGCGGCGTCTGCCGGGGCTGGTGGAACTGCGTTTCCACGATGGCAGCGCATTCGCCGATGCGGCCAC CCGCGGCTGGATCAGCGCCCATGTCATGCCCCATCTCCAGAACGACAGTGCGCCGCGCAAGGTCGAGACCGTGGCCCTGCAGGCCGAATGGGACGTCGCC CTGGACGAGGTCCAGCCGGTGTTGCGCAAGGACGGCCTGAAGGCGGCGGTACAGGTGTTGAAGCAGGGCATGAAGCGCGCCCACGGCGGACGCGCCCGGT TCTTCTGGCAACTGAGCCTCGCGCGACTGTGCTTCCTGGCGAAGAAGTACGAGCTGGCCAAGACCCAGCTGGAGAGCCTCGACCATCAGTTGCACGAATC GGGATTGCACGCCTGGGAGCCCGATCTGGCGCTGGATGTACTGCACCTGCTGCATAGCTGCTGCGAGCTGTTGCCGCAGAACCACGCCGTGCGAGAACGC AAGGAAGACATTTATCGCAGGCTGTGCCACCTCGATCTCGAGGTGGTGCTCGAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCTTCGCGCCCTCAATTCTCAAGGAGAAAAAGCCATGGCCAAAGAAGGCTCGGTAGCCCCAAAGGAACGCATCAACGTCACCTTCAAGCCCGCCACTGG CGGTGCCCAGGAAGAAATCGAACTGCCGTTGAAGCTACTGGCGATCGGCGATTACACCCAGCGCGCGGATGAGCGCAAGGTGGAGGACCGCAAGCCGATC GGCATCGACAAGATGACCTTCGACGAGGTCCTGGCCAAGCAGGAGCTGGGGCTGACGCTGAGCGTACCCAATCGTCTCCAGGAGGAGGGCGGCAGCGACG AGCTGGCGGTGGGGCTGCAGATCAACTCGATGAAGGACTTCAACCCGGCCAGCATCGTCGAGCAGGTGCCCGAGCTGAAGAAGCTGATGGAGTTGCGCGA TGCGCTGGTGGCCCTCAAGGGCCCGCTGGGCAACGCCCCGGCGTTCCGCAAGGCCATCGAAAGCGTACTCGCCGACGACGAGTCCCGTAGCCGTGTGCTG
Amino Acid Sequence
>type VI secretion-associated protein
MTYSSKLSSHYLELAEQPISKDVFAGEDVRFSSEYEALENELGKALSLHENGQTDWLKILENSEALLRAQSKDLRVAAWLTWALYQRESFPGLLAGLGLL ERLCSRHWVEIHPLKARTRAAAIAWLVPRLEQALNENVPIKEQLPLFRRLAEHLEKLDTALTAQLGDDAPLLLPISRRLSGMLQRAADNQPEPGVVGAVV AQVKQAASQLLAPGAPIDNERDAHKAMRAQQEAARPLCAWWLKQKATDLRALRLNRTMLWLPIESMPERNAEQVTALRGVPADKLKSYQERFAQGLYADL LVELEASLARAPFWFDGQRLVWECLQGLNAEQAMREVEMHFALLLRRLPGLVELRFHDGSAFADAATRGWISAHVMPHLQNDSAPRKVETVALQAEWDVA LDEVQPVLRKDGLKAAVQVLKQGMKRAHGGRARFFWQLSLARLCFLAKKYELAKTQLESLDHQLHESGLHAWEPDLALDVLHLLHSCCELLPQNHAVRER KEDIYRRLCHLDLEVVLE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site