Pseudomonas aeruginosa PAO1, PA3177
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGTTCATCCAGGTCGCGGTGCTGTTGCTACTGACGATCTTCGTGCTGTTCCGCCTGCTCGGCCGCAACTACGACGCCGCGGTGCTCTGCGCCGGCTTCCT CGGCCACGGCCTGGGCGCCACGCCCAACGCGGTGGCCAACATGGGCGCGGTCTGCGAGCACTATCGGGTGTTCTCGCACAAGGCCTTCATCATCGTGCCC CTGTGCGGCGCGGTACTGATCGATCTCGTCGCCATCCCGGCGATCACCTGGTTCATCAACGCCTTCAGTTGAACCATGGCGGCGCTCCGCTAGCGGAGCG CCAGCTTTCCGACGAGCGCCTCGGCCACTCGCCAGCAAAACGCCATTATTCCGTCGAAATCTCTCCGAAATTCCTACAGAATGTGGAAACCATTCCTAGG AAAACCTGTCTGTGCCTCTGATTTCTCCGTTCTTCAGTTGGCTGGCACGAAACTCGCCTTAGCCCTACTGTCGCCGTCTTTCGCGCCAGAGGTTCCGCGC
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| DNA Sequence for Gene |
>PA3177
ATGGCTCCTCCCAAGCAGTCCAATACCATCGATTTCGACGCCGCCAAGCAGAAGCGCGGCCCCCAGCCCGGCGGCAACGCCAGCGGGCCGCGCGCCAGCA ACCTGACGGAGTTGCGCCAGCAACTGACCCTACAGTTGCAGAGCAGCCTGGAGGCAGAGCGGATTCTCGGCCTGTTCTTCGAGGAAGTCCGCCAACTGAT CCCGCTGGACGCCCTTGGCTACCGCCATCCGGGCTCCGACCTGCGCCTGGAGTTCGGCAGCAGCGCCAAGCATTCGGTGAGCTATCGCCTGAGCCATGAC AGCGACTACCTCGGCGAACTGATCTTCCGTCGCCGCCAGCGCCTCGGCGAAGACGAACAACGGCAACTGGAGAGCCTGCTCGGCACCCTGCTGTTCCCGC TGCGCAACGCCCTGCTCTATCGCGCCGCGATCCAGACCGCCCTGCGCGACGCCCTGACCGGCACCGGCAACCGCATCGCCATGGACCAGGCGCTCGGCCG CGAACTGGAACTGGCCCGGCGCAACCTGCAACCGCTCTCGGTGCTGATGCTCGATATCGACCACTTCAAGCGGGTCAACGACCACTACGGTCACGCCGTC GGCGACGAAGCCCTCAAGGCCGTGGCGGAAACCATCAAGGACCACCTGCGCAATGTCGACATGGTGTTCCGCTTCGGCGGCGAGGAATTCCTCGTCCTGC TGTCCAGCACGCCGCTGCAGGCTGCCTGCATGGTCGGCGAACGCCTGCGCCAGGCGGTGGAGGAACTGGACTACCGGCACGCCGGCGAACCGCTGAAGCT GTCGATCAGCCTCGGTTGCGCCGACCTGCGGCCCGGCGAAGGCAGCGACGACCTGCTGCGACGGGTCGACGAGGCGCTCTACGAAGCCAAGCGCGACGGC CGCAACCGCCTGCGCTGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTTGCCGACTCGCACACCCCGAAGCGCGGAGCGGGCGCATCGGGCGACGGCAGTAGCAACGGCTCTCACCGGCGCAGTCACGGTTTCCGCCAAGGTCC TGCCTCTTATGGCTGCGCCGGCTCGTCCGGGCCGCCAAAGGCCTGGCGCAAGCGGACGCGCTTCTCCAGCAGCCAGCCGCTGGTTTCCTTGCCGTCTCGA GCCACGTACATGACGTTCAGCCACTCGCCGCTCGGCTTGTAGACAGTGATGAAGTCGCCGGGAATCACGAAGACCCCGGTGACACAGTCGGCACGCGGCG CGCTGTGGAAATAGGCGCGCCCCTTGTCGATCACCTCGCCCTCCAGCGGCGGACGGAAGTTGTCCTCGGGGCCGGCCGTCGCCTCGCCAAGGCTTGCGCA GCTCTGCGCCGGCATCGCCGCATCCGCGGCCAGCCCGGCGACGCTCCATAGCATGCAGAGCGCGATAGCCAGGATCCTGTGCATTTCACCACCTCCTTGC
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| Amino Acid Sequence |
>diguanylate cyclase
MAPPKQSNTIDFDAAKQKRGPQPGGNASGPRASNLTELRQQLTLQLQSSLEAERILGLFFEEVRQLIPLDALGYRHPGSDLRLEFGSSAKHSVSYRLSHD SDYLGELIFRRRQRLGEDEQRQLESLLGTLLFPLRNALLYRAAIQTALRDALTGTGNRIAMDQALGRELELARRNLQPLSVLMLDIDHFKRVNDHYGHAV GDEALKAVAETIKDHLRNVDMVFRFGGEEFLVLLSSTPLQAACMVGERLRQAVEELDYRHAGEPLKLSISLGCADLRPGEGSDDLLRRVDEALYEAKRDG RNRLRCA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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