Pseudomonas aeruginosa BL06, Q060_00792
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL06 genomic scaffold adgfq-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGCGCGCCTACGCGCCACTGGGAGCCTTGCTGCCATCGTGCGCCGGGCTGGTCCATCCGGGCGGTATCGGCGCCATGAGCCTGGCCTTGGCGGCGGGG GTGCCGCAGGTGCTGCTGCCCTGTGCCCACGACCAGTTCGACAATGCTGAACGGCTGGTCCGGCTCGGCTGCGGGATGCGCCTGGGCGTGCCGTTGCGCG AGCAGGAGTTGCGCGGGGCGCTGTGGCGCTTGCTCGAGGACCCGGCCATGGCGGCGGCCTGTCGGCGTTTCATGGAATTGTCACAACCGCACAGTATCGC TTGCGGTAAAGCGGCCCAGGTGGTCGAACGTTGTCATAGGGAGGGGGATGCTCGATGGCTGAAGGCTGCGTCCTGAACGGTGCTGGCATAACAGATAGGG TTGCCATGATTTTGCCGTATCGGCAAGGCTGCGCGCTTGACAGCGTCATACCCCGGGCCAATTCTGCTGTGATGCATTTTATCGATCAGGGCTTACTGCA
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| DNA Sequence for Gene |
>Q060_00792
ATGAGGAATGACGGAGGCTTTTTGCTGTGGTGGGACGGTTTGCGTAGCGAGATGCAGCCGATCCACGACAGCCAGGCCGTGTTCGCCGTCCTGGAAAAGG AAGTGCGGCGCCTGGGCTTCGATTACTACGCCTATGGCGTGCGCCACACGATTCCCTTCACCCGGCCGAAGACCGAGGTCCATGGCACCTATCCCAAGGC CTGGCTGGAGCGATACCAGATGCAGAACTACGGGGCCGTGGATCCGGCGATCCTCAACGGCCTGCGCTCCTCGGAAATGGTGGTCTGGAGCGACAGCCTG TTCGACCAGAGCCGGATGCTCTGGAACGAGGCTCGCGATTGGGGCCTCTGTGTCGGCGCGACCCTGCCGATCCGCGCGCCGAACAATTTGCTCAGCGTGC TTTCCGTGGCGCGCGACCAGCAGAACATCTCCAGCTTCGAGCGCGAGGAAATCCGCCTGCGGCTGCGTTGCATGATCGAGTTGCTGACCCAGAAGCTGAC CGACCTGGAGCATCCGATGCTGATGTCCAACCCGGTCTGCCTGAGCCATCGCGAACGCGAGATCCTGCAATGGACCGCCGACGGCAAGAGCTCCGGGGAA ATCGCCATCATCCTGAGCATCTCCGAGAGCACGGTGAACTTCCACCACAAGAACATCCAGAAGAAGTTCGACGCGCCGAACAAGACGCTGGCTGCCGCCT ACGCCGCGGCGCTGGGCCTCATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCGCAGGGCGCGCCGGCCGGCGCGCCCTACCAGATCTGGCAGGTTGCCTGCCGTTCATCCTCCTTTAGTCTTCCCCCTCATGTGTGTGCTGGTATGTCC TCCGACTGAGAGGGCCCAGGAGTATCAGGGTAGGGATGCCGCCTTTTTTTTCTCGGCCGGCACGACACGGGGACTTGGTCATGATCGAATTGCTCTCTGA ATCGCTGGAAGGGCTTTCCGCCGCCATGATCGCCGAGCTGGGACGCTACCGGCATCAGGTCTTCATCGAGAAGCTGGGCTGGGACGTGGTCTCCACCTCC AGGGTCCGCGACCAGGAATTCGACCAGTTCGACCATCCGCAAACCCGCTACATCGTCGCCATGAGCCGCCAGGGTATCTGCGGTTGCGCCCGCCTGTTGC CGACGACCGACGCCTACCTGCTCAAGGAAGTCTTCGCCTACCTGTGCAGCGAAACCCCGCCCAGCGATCCGTCGGTATGGGAGCTTTCGCGCTACGCCGC
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| Amino Acid Sequence |
>regulatory protein rhlR
MRNDGGFLLWWDGLRSEMQPIHDSQAVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEVHGTYPKAWLERYQMQNYGAVDPAILNGLRSSEMVVWSDSL FDQSRMLWNEARDWGLCVGATLPIRAPNNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVCLSHREREILQWTADGKSSGE IAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGLI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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