Strain | Pseudomonas aeruginosa BL07 genomic scaffold adgfo-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCCTTGCCGCGACCAACCGCGACCTGGGCGCGATGGTCGCCCAGGGCCAGTTCCGCGAGGACCTGCTCTACCGCCTCAACGTGATCGTGCTCAACCTGC CTCCCCTGCGCGAACGCGCCGAGGATATCCTCGGCCTGGCCGAACGTTTCCTCGCCCGCTTCGTCAAGGACTACGGCCGCCCCGCCCGCGGCTTCAGCGA AGCCGCCCGCGAGGCCATGCGGCAATACCCCTGGCCGGGCAACGTACGCGAGCTACGCAACGTGATCGAACGCGCCAGCATCATCTGCAACCAGGAACGG GTGGATGTCGACCACCTCGGTTTCAGCGCTGCGCAATCTGCCAGCAGCGCGCCGCGGATCGGCGAATCGCTGAGCCTGGAAGACCTGGAGAAAGCCCATA TCACGGCGGTGATGGCCTCCAGCGCGACCCTCGACCAGGCCGCCAAGACCCTCGGTATCGATGCCTCGACCCTGTACCGGAAGCGCAAGCAGTACGGCCT
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DNA Sequence for Gene |
>Q061_05254
ATGAGCATGCCGCTGCCGATGAAGCTCCGGACCCGGTTGTTCCTCAGCATTTCCGCGCTGATCACCGTCTCGCTGTTCGGCCTGCTGCTCGGGCTGTTCA GCGTGATGCAGCTCGGCCGCGCCCAGGAACAACGGATGTCGCACCACTACGCGACCATCGAGGTGAGCCAGCAACTGCGCCAGTTGCTCGGCGACCAGTT GGTCATACTGCTCCGCGAAACCCCCGACGGGCAGGCCCTGGAGCGCTCGCAAAACGACTTCCGACGAGTCCTGGAACAGGGCCGGGCGAATACCGTCGAC AGCGCCGAGCAGGCCGCCCTGGATGGCGTCCGCGACGCCTACCTGCAACTGCAGGCGCACACCCCGGCCCTGCTCGAAGCGCCCATGGCCGACAACGACG GCTTCAGCGAAGCCTTCAATGGCCTGCGCCTGCGCCTGCAGGACCTGCAGCAACTGGCGCTGGCCGGCATCAGCGAAGCCGAGACCAGCGCCCGCCATCG TGCCTACCTGGTCGCCGGCCTGCTTGGCCTGGTGGGCGTCGCCATCCTGCTGATCGGTTTCGTCACCGCCCACAGCATCGCCCGGCGCTTCGGCGCGCCG ATCGAAACCCTGGCGCGGGCGGCGGACAGGATCGGCGAAGGCGATTTCGACGTGACCCTGCCGATGACCAACGTCGCCGAGGTCGGCCAGTTGACCCGGC GTTTCGGCCTGATGGCCGAGGCCCTGCGGCAGTATCGCAAGACCAGCGTCGAAGAGGTGCTTTCCGGCGAGCGGCGCCTGCAGGCGGTACTCGACAGCAT CGACGACGGCCTGGTGATCTTCGACAACCAGGGACGCATCGAACACGCCAACCCGGTCGCGATCCGCCAGCTGTTCGTCTCCAACGACCCCCATGGCAAG CGGATCGACGAAATACTCAGCGATGTCGATGTCCAGGAGGCGGTGGAAAAGGCCCTGCTCGGCGAAGTCCAGGACGAGGCGATGCCCGACCTGGTGGTGG ACGTCGCCGGCGAGTCGCGCCTGCTGGCCTGGTCGCTGTATCCGGTCACCCATCCCGGCGGGCATAGCGTCGGCGCGGTGCTGGTGGTCCGCGACGTGAC CGAGCAGCGCGCCTTCGAACGGGTCCGCAGCGAATTCGTCCTGCGCGCCTCCCACGAACTGCGTACGCCGGTGACCGGCATGCAGATGGCCTTCAGCCTG CTCCGCGAACGCCTGGACTTCCCCGCGGAGTCACGGGAAGCGGACCTGATCCAGACGGTGGACGAAGAGATGTCGCGGCTGGTCCTGCTGATCAACGACC TATTGAACTTCTCGCGCTACCAGACCGGCATGCAGAAGCTCGAACTGGCTTCCTGCGACCTCGTCGACCTGCTCACCCAGGCGCAGCAGCGTTTCATTCC CAAGGGCGAGGCCCGCCGGGTCTCGCTGCAACTGGAGCTGGGCGATGAGCTGCCGCGCCTGCAGCTCGATCGCCTGCAGATCGAGCGGGTGATCGACAAC CTGCTGGAAAACGCCCTGCGCCATAGCAGCGAAGGCGGGCAGATCCACCTGCAGGCCCGGCGCCAGGGCGACCGGGTGCTGATCGCGGTGGAAGACAATG GCGAAGGCATTCCCTTCAGCCAGCAAGGACGGATCTTCGAGCCTTTCGTCCAGGTCGGACGCAAGAAGGGCGGCGCCGGCCTCGGCCTGGCGCTGTGCAA GGAAATCATCCAGCTGCATGGCGGGCGCATCGCGGTGCGCTCGCAACCGGGCCAGGGCGCGCGCTTCTACATGCTGCTGCCGGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGGGCCGCTCCCGGCAGGCTTTTCCACAGGCCTCAGGAAGTCGGCACCGCCAGCAGCAGGGCGGCGGTTTCCAGGTCCGGCTCGCCATCGAAGCGGGC CGGACGGTATTTCATCTGGAAAGCGCCGATGACGTCGCGGGTGTCCTTCTCCAGCTCGCCGGTCTGCGGCACCAGGTAACCGTGCCGCGCCAACTGCTGC TGGAACCAGCGCACATCCGGCAGCTGGCCGTTCAGTTCGGCGAGCCGGCGCGCCAATTCGCCGGGCTTCGGCCAGGGCACCAGGCCGGCGTCGGCGAGGC GCTTCCAGGGGAACAGCGGACCCGGATCGACCTTGCGGCCCGGCGCGATATCGCTGTGTCCGATGATCCGGTCCGGGGTGATGCCGTGGCGCTTGGCGAT GTCCTTCAGCAGGGGGATCAGCGCCTGGATCTGTGCTTCGCTGAACGGATACCAGACCCGCCCCTGGGGTGTATCGCGATAGCCCTGGTTGACGATCTCG
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Amino Acid Sequence |
>histidine kinase
MSMPLPMKLRTRLFLSISALITVSLFGLLLGLFSVMQLGRAQEQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVD SAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAETSARHRAYLVAGLLGLVGVAILLIGFVTAHSIARRFGAP IETLARAADRIGEGDFDVTLPMTNVAEVGQLTRRFGLMAEALRQYRKTSVEEVLSGERRLQAVLDSIDDGLVIFDNQGRIEHANPVAIRQLFVSNDPHGK RIDEILSDVDVQEAVEKALLGEVQDEAMPDLVVDVAGESRLLAWSLYPVTHPGGHSVGAVLVVRDVTEQRAFERVRSEFVLRASHELRTPVTGMQMAFSL LRERLDFPAESREADLIQTVDEEMSRLVLLINDLLNFSRYQTGMQKLELASCDLVDLLTQAQQRFIPKGEARRVSLQLELGDELPRLQLDRLQIERVIDN LLENALRHSSEGGQIHLQARRQGDRVLIAVEDNGEGIPFSQQGRIFEPFVQVGRKKGGAGLGLALCKEIIQLHGGRIAVRSQPGQGARFYMLLPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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