Strain | Pseudomonas aeruginosa BL07 genomic scaffold adgfo-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCATCGAGGTGCAGTCCGGCAGCTACCTCGGCGAGGACGACATCGAGCGCCTGGAAGACGTCTACGGGCGCACCGCAGAACCGGCCCTGCAAGTGGTCGC CGGCAGCCGCTGAAGCGTCGACCCGGCCCCCTGGCGGAGCGATCCGCCAGGGGGTTGTTTTTTTCCGACAACCTACGGGATTGACTTTCCCTGGCCCTCC CCATGTTTCCATGAAGTTTCCGGAATATTCACGGGGAGCGGACATCAAGTATTAATGAACCCTTAAAGAAACAGGACTCGGGTTATTAATAAAAGCCACT CAGAAAACACCCGAGATCCATTCCAACCAACCCTGCAAGCCCCTGAAAACGAGGCTTCCGGCTTTATCCTCCAGTTTCTTCGAGTTCGTTCAGTCTTCAT TCAGCCGTTGTTAAGCGAGTCTTAACAAACGTTCAGGCAGCATTCAGCGACATATAAATAACCTCTTCGTACCGCCCTCCCAGTACCGAGGCTTCATTAC
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DNA Sequence for Gene |
>Q061_02815
ATGTCACTGGACTTTCTGCCATTCTCCCGGCCAAGCATCGGCGAGGACGAAATCGCCGCCGTGGAGCAGGTCCTGCGTTCCGGCTGGATCACCACCGGGC CGAAGAACCAGGAGCTCGAACAGCGCTTCGCCGAACGCCTCGGCTGCCGCCACGCGGTGGCGCTATCCTCGGCCACCGGCGCCCTGCACGTCACCCTGCT GGCGCTGGGCATCGGCCCCGGCGACGAAGTGATCACGCCGTCGCTGACCTGGGTCTCCACCGCCAACGTCATCACCCTGCTCGGCGCCACCCCGGTGTTC GTCGACGTCGACCGCGACACCCTGATGTGTTCGGCGCAGGCAGTGGAAGCCGCCATCGGCCCGCGCACCCGCGCCATCGTGCCGGTTCACTACGCCGGCT CCACCCTGGATCTCGAAGGCCTGCGCACGGTCGCCGGGCGCCACGGCATCGCCCTGGTCGAGGACGCCGCCCACGCGGTCGGCAGCGAATACCGCGGGCG CCCGGTAGGCTCCCGCGGCACGGCGATCTTTTCCTTCCACGCGATCAAGAACCTGACCTGCGCCGAAGGCGCGATGTTCGTCAGCGACGACAGTGCCCTC GCCGAACGGGTCCGCCGCCTCAAGTTCCACGGCCTCGGGGTCGATGCCTACGACCGCCTGAGCCATGGACGCAAGCCGCAGGCGGAAGTGATCGAGCCCG GTTTCAAATACAACCTGGCCGACCTCAACGCCGCCCTCGCGCTGGTCCAGCTCAAGCGCCTGGACGCGCTCAACGCGCGCCGCCAGGCCCTCGCCGAACG CTACCTGGAGCGCCTCGCCGGCCTGCCGCTGGCGCCGCTCGGCCTGCCCGCGCACAAGCAGCGCCACGCCTGGCACCTGTTCATCCTGCGCATCGACGCC GAGGCCTGCGGCCTGGGCCGCGACGCCTTCATGGAAGCCCTGAAGGTGCGCGGCATCGGTAGCGGCATCCATTTCATCGCCAGTCACCTGCACCACTACT ACCGCCAGCGCCAGCCGCGCCTGAGCCTGCCCAACAGCGAGTGGAACTCGGCCCGCCTGTGCTCCATCCCGCTGTTCCCCGACATGCGCGACGACGACAT CGAGCGCGTCGCCCGCGCCATCGAGGAGATCCTGGAGAAACGTCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCCCTATCCGATCGACCTGGTCTCGGTGGTGATCCCGGTCTACAACGAGGAAGCCAGCCTGCCCGAACTGCTGCGCCGCACCGAGGCCGCCTGCCTGGA GCTGGGCCGCGCCTTCGAGATCGTGCTGGTCGACGACGGCAGCCGCGACCGCTCCGCGGAACTCTTGCAGGCCGCCGCCGAACGCGACGGCAGCGCCGTG GTGGCGGTGATCCTCAACCGCAACTACGGCCAGCACGCGGCGATCCTCGCCGGCTTCGAACAGTCCCGTGGCGACCTGGTGATCACCCTCGATGCCGACC TGCAGAACCCGCCGGAGGAAATCCCGCGCCTGGTGGAGCGCGCCGCGCAGGGCTACGACGTGGTCGGCAGCATCCGCGCCGAGCGCCAGGACTCGGCCTG GCGGCGCTGGCCTTCGCGCCTGGTGAACCTGGCGGTGCAGCGCTCCACCGGGGTCGCCATGCACGACTACGGCTGCATGCTGCGCGCCTACCGGCGCAGC
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Amino Acid Sequence |
>UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
MSLDFLPFSRPSIGEDEIAAVEQVLRSGWITTGPKNQELEQRFAERLGCRHAVALSSATGALHVTLLALGIGPGDEVITPSLTWVSTANVITLLGATPVF VDVDRDTLMCSAQAVEAAIGPRTRAIVPVHYAGSTLDLEGLRTVAGRHGIALVEDAAHAVGSEYRGRPVGSRGTAIFSFHAIKNLTCAEGAMFVSDDSAL AERVRRLKFHGLGVDAYDRLSHGRKPQAEVIEPGFKYNLADLNAALALVQLKRLDALNARRQALAERYLERLAGLPLAPLGLPAHKQRHAWHLFILRIDA EACGLGRDAFMEALKVRGIGSGIHFIASHLHHYYRQRQPRLSLPNSEWNSARLCSIPLFPDMRDDDIERVARAIEEILEKRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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