Strain | Pseudomonas aeruginosa BL08 genomic scaffold adgeD-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGCAAGCAGCCAGGCTCACATGCGTACAAAAAGGCCACAGTAGAGCGGCCAGATATTCCGAATATATTGAATTGGACTACCCCCGATACGATAGACATT CCCGGCCTATGCTTTGAGCATAGGAGGAAGTCCATGTGACCTGCCCCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGAC GGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTGA AGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
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DNA Sequence for Gene |
>Q062_03916
ATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGCCGCCGCCATGGCGTCGCGGTGGAGCACGAACGTCTGAGTTTG CCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGACGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGTGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATTGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAACT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCACCGCTTGTATCGTAGCTTGCACCAGATTCATGGACTGCACAGCGCCGAGCCTCAAGGGCCTAGACCAGCAA CGCGCGAAAAAACTGGCGATACGCCAAAGGCAACCACTTGCCCCCTTCCCCATCGGCGCAGGGCCTATTCAACTAACCCCAGCGAGCATAAGACAACATC TCTAGGACGAGCACTCTCAGCCTAAATGGGTATCAGGGATTAGCAGACCACTACAATCACACCCAACAAAGAAACGGTTCATACGTAGCAAAGTAGCGGG CACGAGAACGCAGCCATCGATTCCTGGGAGAACCCTGCGCGGTAATGATGAATGATCTTCGCCAACGGATTGTCGGCTGCTAAGAGCCCAGGCATGAGAC TAGCTTGAGTCTCGTAATCCTGAAGCTTACTAACACCTGCATCGTGCATGGTCTGGAAGGCCTCAGGACTCGGCCCAAGGGTGCCCTTTGATAGGACCTC
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Amino Acid Sequence |
>hypothetical protein
MQARTGISERRACQLIGLSRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGVAVEHERLSL PSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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