Strain | Pseudomonas aeruginosa BL08 genomic scaffold adgeD-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACAGATGCTGCAGGCAGACCTGGCCAAGGCCGGCATTCAGCTGACCATCCGTTCCCTGGAATGGGGCGAGCTGCTCAAGCGTTCGAAGGCCGGCGAGCAC GACCTGTCGCTGCTTGGCTGGGCCGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGAACCTGAGCTGCGCCGCCGCCGAGTCGGGTGAAAACCAGG CGCGCTGGTGCGACAAGGACTTCGAGGCGCTGATGCGCAAGGCCCGCGAGGTGAGCGATCCGGCCGAGCGGGCGAAACTGTACGAGCAGGCCCAGGTGGT ATTCCACGAACAGGCCCCATGGATACCGCTGGCCTACCCGAAGCTGTTCAACGTCCGGCGGAACACGGTGCAGGGCTACGTGATCAATCCGTTGAGCAAC AACAACTTCGCCACCACCTCGGTGAAGCCGTAGAAGAACAAGGACCACAGCCCTGCCGCCAGCGGGGCGCACGGTCCGCGATGAGGAGTTACCCGCCAAC
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DNA Sequence for Gene |
>Q062_03653
ATGCTTAGTTTCATTGCACGACGATTGGGGTTGCTGATCCCCACCTTCTTCGGCGTGACGCTGCTCACCTTCGCGCTGATCCGCCTGATTCCCGGCGACC CGGTGGAAGTGATGATGGGCGAACGTCGCGTCGATCCGCAGATGCATGCCGAGGCCCTGCACCGCCTGGGCCTGGACAAGCCCTTGTACCAGCAGTACCT GGACTACGTGGGCAATCTGGCACAGGGCAATCTCGGCGAATCGCTGACCACCCGCGAAGGCGTCTGGCACGAATTCCTCACCCTGTTCCCGGCGACCCTG GAACTGTCCCTGGCCGCCATGCTCTTCGCCGGCACCTTCGGCCTGCTGGCCGGGGTGATCGCCGCCCTGAAACGCGGTTCGTTGTTCGACCACGGGGTGA TGACGGTGTCCCTCGCCGGCTATTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGCTGTTCTCCGTGTCGCTGGGCTGGACGCCGGTGTCCGG CCGTCTCGACCTGCTCTACGACATCGAGCCGAAGACCGGCTTCATGCTGATCGACACCCTGCTTTCCGACGAACAGAGCTCGTTCCTCGATGCCGTGCGC CACCTGATCCTGCCGGCCATCGTGCTGGGCACCATCCCGCTGGCGGTGATCGCCCGCATGACCCGCTCGGCGATGCTCGAGGTGCTGCGCGAAGACTATG TGCGCACCGCCCGCGCCAAGGGCCTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATTCCGGTGCTGACGGTATTCGGCCTGCA GGTCGGCACGCTGCTCGCCGGCGCGGTGCTGACCGAAACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCCGTCGCGACTAC CCGGTGGTGCAGAACGGCATCCTGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCGCGCATTCGCC ACCAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCCAGCCGATGAACGCCATGCACAACGCTCCCGCCAGCGACCCGAGCCTGGTCTACCCGTCCCCGCTGAAGGAATTCTGGCAGTCCTTCGCGCACAA CAAGGGCGCCCTCGGCGGCCTGCTGTTCATGCTGCTGATCGTGTTCTGCGCGCTGTTCGCCCCCTGGGTCGCCCCCTACGATCCGAGCGAGCAGTTCCGC GACTTCCTGCTGACCCCGCCATCCTGGCTGGAAGGCGGCCAGGCGCGCTTCCTGCTCGGCACCGACGAGCTGGGCCGCGACCTGCTCTCGCGGCTGATCC ACGGCGCCCGCCTGTCGCTGCTGATCGGCCTGTCCTCGGTGGTGATCTCGCTGATCCCCGGCATCCTCCTCGGCCTGCTCGCCGGCTTCTCGCCGAACCG TGCCGGGCCGCTGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCGTCGCTGCTGCTGGCGGTGGCCATCGTGGCGATCCTCGGCCCGGGCCTGATC
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Amino Acid Sequence |
>peptide ABC transporter permease
MLSFIARRLGLLIPTFFGVTLLTFALIRLIPGDPVEVMMGERRVDPQMHAEALHRLGLDKPLYQQYLDYVGNLAQGNLGESLTTREGVWHEFLTLFPATL ELSLAAMLFAGTFGLLAGVIAALKRGSLFDHGVMTVSLAGYSMPIFWWGLILIMLFSVSLGWTPVSGRLDLLYDIEPKTGFMLIDTLLSDEQSSFLDAVR HLILPAIVLGTIPLAVIARMTRSAMLEVLREDYVRTARAKGLSPARVVFVHALRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIDAISRRDY PVVQNGILLVATLVILVNFVVDILYGLANPRIRHQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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