Pseudomonas aeruginosa PAO1, PA3039
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 3403801 | 3403805 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 3402741 | 3402753 | + |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| AmrZ binding site | 3402752 | 3402764 | + |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCAGAGCGGC-N98-GCCGCTCTGG | 3401829 | 3401946 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AAGAGGCCACCC-N2-GGGTGGCCTCTT | 3402015 | 3402040 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 758 | 3402017 | 3402038 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |