Pseudomonas aeruginosa BL08, Q062_03118
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL08 genomic scaffold adgeD-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGAACAGGCTTGCCGGATTCACCGAATAGACCAGCAGGGAACCGCAGAACAGCCCCAGGCCCAGTTGGCCCAGGCGGCGCAACCAACCGTCATGGCGG AGCAACACCACCAGCAGGACGCCGTACAACAGGCAATCGACCCGCGCCACCGAATCCTTGACCTGCAACGACTGTTCCCAATCCCCCAGCCACCATCCAG CGGCCACGCCCAGCACGACTCCGGCGCCGACATGAATGCCCGCCTGGATCATCGTCACCCTTCCCCCCTCGGAAATGGTCGGACAGTGCAAGCCGCCACT ATGCCCACGGCAAGCTGAACCATCGCTGAACGAATACCAGCAAATGGCCTTCGGCCACTTCGCCGACGCAACTCCTGCAAAACCCGGCGGTCTTCTCCCT GTGACAGGACGCCGCCCCGCACAGAAAAAATCTGCTGCGACCACTTGGGAACTCGCCCGAGAGGCCATACTCTGTCGCGCAAATTCCCATGAGGTGGCTG
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| DNA Sequence for Gene |
>Q062_03118
ATGCGCACCGACGCTCCCGTTCCAGAACATCCCGCTCCACCCAGCTCTCCCGCGTCCCCACAACGCATCCGGCTGATCGATCGGATTACCGCCTACCGCC AGCCCATCGGCCTGGTCTTCACCTTGCTGCTGTTCGGCCTGGCGCTGGTGGCCTGCTACCACCTGCTACGGGAGATCGATCCCGGCGCCCTCCACGATGC CATCGCCGACGTGCCCAGGCCGGCGCTGCTCGGCGCCCTGAGCGCGACCGCCCTCGGCTTCGTCATCCTGCTCGGCTACGAGTGGTCGGCCAGCCGCTTC GCTGGCGTCACGCTGCCCATGCGCAGCCTGGCCACCGGCGGCTTCAGCGCCTTCGCCATCGGCAATGCGGTAGGCCTGTCGCTGCTTTCCGGCGGCTCCG TACGCTACCGACTGTATTCCCGGCATGGCATCGGCGCTGCCGAAATTGCCCGGATGACGCTATTTGCCAGCCTTTCCCTGGGCTGCGCACTGCCGGTGCT GGCGGCACTCGCCGCACTCTGCAATCTCGACGATGCGGCGTCGGCGCTGCACCTGCCCCACGCCCTGGTCGCCGTCATCGCGATCGCCGTCCTGTTGCTG GCTGTCGGCCTGGTGGCGTTCCTGGCCCGGCACCGTCTGCCGGGAGAACGGCCGTCCCCCGACAGCCTGCTGGTCCGCCTCGGCCGCCGCAGCCTGCGCC TGCCAGGCCTGCGCCTGTCGCTGCTGCAACTGCTGATCACCGCCCTCGACGTCGCCGCCGCCGCTACCGTCCTTTATCTGTTGCTGCCGGAAACCCCACC CTTCGCGGCGTTCCTGCTGGTCTACCTGCTCGCCCTGGCCGCCGGCGTACTCAGCCACGTACCGGGCGGAGTCGGGGTGTTCGAGGCGGTGCTGCTGGCC GCGTTCGCCGGCCAACTGGGCGCCGCGCCGCTGGCCGCGGCCCTGCTCTTGTACCGCTTGATCTACGTGGTGCTGCCGCTGCTGCTGGCCTGCCTGTTGT TGCTGTTCCTCGAAGCACGCCGGTTGTGGGTGACACGCCAGGCGATCCGCGTCGCCTCGGGTTTCGCCGCACCGATCCTGGCGATCCTGGTCTTCCTCTC CGGTGTCGTGCTGCTGTTTTCCGGCGCCACACCGGCGATCGACACCCGCCTGGAGCACCTCGGCTTCCTCATTCCACATCGCCTGATCGATGCCTCGCAC CTGGTCGCCAGCCTGATCGGCGTGCTCTGCCTGCTGCTCGCGCAGGGTTTGCGCCGACGGCTGTCGGCCGCCTGGGCCCTGACCCTGGTGCTGTTGCTGG TGGGCGCCCTGCTTTCGCTGCTGAAAGGCTTCGACTGGGAAGAAGCCAGCCTGCTGAGCCTGACCGCCGCGCTGCTCGCCATGTTCCGCCGCTCCTTCTA CCGTCCCAGCCGGCTGATGGAAGTACCCTTCTCGCCGCTCTATGTAGGCGCCAGCATCTGCGTGGTCGGCGCCTCGGTCTGGCTGCTGCTGTTCGCCAAC CAGGACGTGCATTACAGCAACCAGCTCTGGTGGCAGTTCGCCCTGGACGCCGACGCCCCGCGCGCCCTGCGCGCCGCCCTCGGCAGTTGCCTGCTGCTCC TGGCCCTGGCCCTTGGCTGGCTGCTGCGCGCGGCACCGCCGGCGATCCGCGAGCCGAACGCGGAAGAGCTGCAGCGCGCGGCGCGGATCATCCGCCACTC GGACCAGCCGGATGGCGGCCTGGCCCTGACCGGCGACAAGGCCCTGCTCTTCCATGAGAGCGACGACGCTTTCCTCATGTACGCCCGCCGCGGTCGCAGC ATGATCGCCCTGTACGACCCGATCGGCCCGGCCATGCAGCGCGCCGAACTGATCTGGCAGTTCCGCGACCTCTGCGACCTGCACCATGCCCGCCCGGTGT TCTACCAGGTGCGTGCCGAGAACCTGCCGTTCTACATGGACATCGGCCTGACCGCCCTCAAGCTCGGCGAAGAAGCGCGAGTCGACCTGCTGCGCTTCGA CCTGGAGAACAAGGGCAAGGAAATGAAAGACCTGCGCTACACCTGGAACCGCGGCCAGCGCGACGGCCTGGCCCTGGAGTTCCATGAACCGGGCCAGGCT CCGCTGGACGAGCTGAAGGCGATATCGGACGCCTGGCTGGGCGGCAAGCAGGTGCGCGAGAAAGGCTTCTCCCTGGGCCGCTTCACCCCGGCGTACCTGA ACTTCTTCCGCATCGCCATCGTCCGCCACCAGGGCAAGCCGGTGGCCTTCGCCAACCTGCTGGAAACCGACAGCCGCGAACTGGCGAGCCTCGACCTGAT GCGCGTGCACCCGGAGGCGCCGAAGCTGACCATGGAGTTCCTCATGCTCGGCCTCATCCTCCACTACAAGGCCCAGGGCCACGCGCGCTTCAGCCTCGGC ATGGTGCCGCTGGCCGGGCTCCAGCCAAGGCGCGGCGCGCCGTTGACCCAGCGCCTGGGCGCGCTGGTCTTCCGGCGGGGCGAACAGTTCTACAATTTCC AGGGGCTGCGACGCTTCAAGGACAAGTTCCAGCCCGACTGGGAACCCCGCTACCTGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCCCTGGCCGATAC CGCCGCGCTGATCGCCGGCGGCCTGACTGGATTGGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATGTCTGTCGTGAAACGTCACTGGCGCCGTTTTCTGGTCGCCGCCCTGGTGCTGATCGTCGGTGCCGCCCTGCTGCTCTGGAGCCGACCGGCGGCCCAG GCGAAACTGGAAGCCCTGGACCTCGACGACGGCGGCCACGCCACCCTTGCCGAACCCGGCGAGAAGCCGCGCTCGCGGGTGGTGGTGATCGCCGCCCCCG AACAGCAACTGAACGACGCCCAGATGCTGAACCTGGCTCACGACAGCGCCGCCCGGGTGATCCAGTACTTCCCCCCGGAAAACAGCGATTGCAGGGCGCA GCAGTCCCGGCTCGAAGCGGTCATTGCCCGCCTCGGCGGCAAGCCGAACCTGGTCGCCGGCATCGGCCCAGGCTCGACCACCGCCTGGCGCTGGCTCGCC AGCCAGGACGACGACAAGGCCAAGGCGCTCTCGGTCGGCTTCGACATTGCCCTGGCCGAGCGCGACTGCGACGCCCCGCTGCCGCACCAGGCGTCGCACG
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| Amino Acid Sequence |
>membrane protein
MRTDAPVPEHPAPPSSPASPQRIRLIDRITAYRQPIGLVFTLLLFGLALVACYHLLREIDPGALHDAIADVPRPALLGALSATALGFVILLGYEWSASRF AGVTLPMRSLATGGFSAFAIGNAVGLSLLSGGSVRYRLYSRHGIGAAEIARMTLFASLSLGCALPVLAALAALCNLDDAASALHLPHALVAVIAIAVLLL AVGLVAFLARHRLPGERPSPDSLLVRLGRRSLRLPGLRLSLLQLLITALDVAAAATVLYLLLPETPPFAAFLLVYLLALAAGVLSHVPGGVGVFEAVLLA AFAGQLGAAPLAAALLLYRLIYVVLPLLLACLLLLFLEARRLWVTRQAIRVASGFAAPILAILVFLSGVVLLFSGATPAIDTRLEHLGFLIPHRLIDASH LVASLIGVLCLLLAQGLRRRLSAAWALTLVLLLVGALLSLLKGFDWEEASLLSLTAALLAMFRRSFYRPSRLMEVPFSPLYVGASICVVGASVWLLLFAN QDVHYSNQLWWQFALDADAPRALRAALGSCLLLLALALGWLLRAAPPAIREPNAEELQRAARIIRHSDQPDGGLALTGDKALLFHESDDAFLMYARRGRS MIALYDPIGPAMQRAELIWQFRDLCDLHHARPVFYQVRAENLPFYMDIGLTALKLGEEARVDLLRFDLENKGKEMKDLRYTWNRGQRDGLALEFHEPGQA PLDELKAISDAWLGGKQVREKGFSLGRFTPAYLNFFRIAIVRHQGKPVAFANLLETDSRELASLDLMRVHPEAPKLTMEFLMLGLILHYKAQGHARFSLG MVPLAGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPAGLDPLVALADTAALIAGGLTGLVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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