Pseudomonas aeruginosa BL08, Q062_01126
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL08 genomic scaffold adgeD-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTGGTGGCTTTCCAGGCCCAGCCGGTGCAAGGCGTTGGCGGTCTGGGTGACGCGGGCGAACAGCTCAGCATAGCTGATCCGCAACGGTTCTTCGGC GGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCGCTGGGCCGAGCGTTGCAACAGTTCGTAGGTGCTGGACGGCAGGTCGCGCTGT TCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGGCGATCGATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGCGGAC ACTCGCCGGATCGCTCCGGCACCGTCCCGAAGATGCCACCCCCGTCGTCGCCCTACCGTTGTCTTTTTGTAGCGCGCCGCCGGTCGCACGCACGCACCCT CCCGGAAGCTGCCCCGGGAGCTTCGCGCAGCCGCCTCCAGGCCCCGTCCGGCCAGGCCTGGAAGGCGCCGGCCAAGCATGGATTTCTCCCCGCTGGCAAC
|
|
| DNA Sequence for Gene |
>Q062_01126
ATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCCGTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGC AGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGAAAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACC GCGCGCCCCGCGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGTTGAAAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGCCAAAGAAGGCCGG GACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAGCCGAAGCCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCA AGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCATCCATGACCTCGGCTTCCCCTACTGCACGCCGATCCAGGCGCAGGTACTGGG CTTCACCCTGCGCGGCCAGGACGCCATCGGCCGCGCCCAGACCGGTACCGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAGTTGCTGCAGACC CCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATCGCCCCGACCCGCGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGA CCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACTTCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGC CACCCCAGGCCGTCTCCTGGACTTCAACCAGCGCGGCGAGGTGCACCTGGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATG GGCTTTATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAGGGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGA ACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGCCGGAGAACGTCGCCAGCGATACCGTCGAGCAGCATGTCTACGCCGTGGCCGG CAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCGCAGAACAACTGGGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAG GAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGACGTGCCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAGA TCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCGACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAAGACCCGGACGACTA CGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGTACCTCGATCAGCTTCGCTGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAA CTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTCAAGCCGGTACCGCGCAAGCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGCAGGCGTGGAGAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCGGGTCGGCGCTT GCCCGTCAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAAG CCGAGCAACTGCTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGGT GGAGTTCCCCGCCGGTCGCGGCGACTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGAGTCAAGACTTCACCCTACATCGTTCGCGAA CAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACCG
|
|
| Amino Acid Sequence |
>RNA helicase
MLYTGARSFLNHYEIAVLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRAPRADNESGAPRAVEKAEKGEKPAKPAAKEGR DAKPRSDKPRRERKPKPVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQT PPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDM GFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIE ERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEE LLGRKITCEMPPAELLKPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|