Pseudomonas aeruginosa BL09, Q063_01912
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL09 genomic scaffold adgge-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGTCGCCCCGCCTTAGATTGGCGAGAAGCGCGGCCAGGCCGATTCGATCGGCCTTGGCGCCGCTGGCAGTGTCTTCGAACACTCGCTCGCAACCCGCC TTGGCCATCGCATCGCGTTGCAGATCCAGTAGTTGATCGTCGGTGGAAATGCGCACGTACCCAATCAGCATGATTTCGTCCAGAAATGCGCGAAAGGCAG CATAGGTGAATTTTGAAAGCGAGAAATCGTTACTGGACTAAAAGTACGCGGCTTCTGGGGGCGGCCAAGGGGAACGAGGCTGGCGTCCAGAAAACGGTCG TCTGATGGACGCTTCCACGAACGGAGCGATACCGCAAAGGGAAGAATGGAGTGCAACCATCGTAGAGCTTCAAACTGAGATATTGCAGTTGATTGCCGCA TCTGGCCGGCCTATTGCCGTGCATTTTCTACCTACTACTGCATCGCTCAAGAAGGTTCTGTAAATATATTGGTTCAACTCTTTCGATAGGAAAGCCATTC
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| DNA Sequence for Gene |
>Q063_01912
ATGACAAATAATAGTGCGCCACCACTTGTCGTGACCAGAGGGAATGATAATGGTTACGAGCCTGGGTCGATGGTTATTACGCATGTACAGGCTAGTGGGC TAGACATAATCCAGTACATTCCAGGTCGGTCAAGCTACGGTACTCCACCATTTGTCCCGCCAGGACCAAGCCCGTATGTTGGCCCTGGAATGCAAGAGTA CAGGAGGCTAAGAGATACTCTTGATAAGTCCCATTCAGAACTCAAGAAAAACCTGAAGAATAAAACCTTGAAGGAGGTGGATGAACTCAAGAGTGAAGCG GGGTTGCCAGTTAAAGCGGTCAGTGCCAATGACATCCGCGATGAAAAGAGTATCGTTGATGCACTCATGGATGCCAAAGCAAAATCGCTAAAGACCATTG AGGATCGCCCGGCCAATCTTTATACGGCTTCAGACTTTCCTCAAAAGTCAGAGGCGATGTACCAGAATCAGTTGCTAGCCAGTCGAAAGTTCTATGGAGA GTTCCTTGATCGACATATGAGTGAGCTGGCCAAAGCGTACAGCGCTGATATCTATAAGGCGCAAATCGCTATCTTGAAACAAACGTCTCAAGAACTGGAG AGTAAAGCCCGGTCAATGGAGGCGCAAGCCCAGCAGGTCACTCAACAGCTCGGTGCCGACTTCAACGCGATCACCACTCCGACCGCCACCAAGGTCCAGC AACGTGTGAAAGCAGTGGATGCTAGTCTGTCTCAGGTTTCCACCCAGGTCAGTGGTGCAGTCGCCTCGGCAACCCAGGCGGTGCAGGTCAAGACAGCGCA AGCCCAGCAACAAGCCAACAGCCAGATTTCGTCCAGCCAGAACCTGATCAGCGCGGCATTTCGGAATCAGATTGCCTTGGCAGCACAGGCCAGTGGAGAA GCCCAGGTCACGGCTTTCAACACCAAAGTCAAGCAGATCGTCAACGAAGCCACGGCGTTTTCGACAGCACGAAAACAAGCGCTGGCTCAGTTTGCTGCCA ATGCGGCCGCCGAGGTCGAAACCGAGGTCAACAGGCTAACCGTCCAGGTCAAGGCAAGCCCCACCAAGGCGGCTTCGCAAGCTGCACAAGCAACCCTTCG ACAATTCACTGAAAGCACCTATGCCAAGGTGAACACCTATGCCCAGCAGACCGAAGCAGCGCTGCAGGCCAAAGCCAAGGAGGTTTCGGCAGCGGTAGCC GAGGCACAGCGTGCGGCGACCAACGATTTGCAAAAAACAGCCGATGTAGTACCAGGTCAGATCATTCAGGCTGCGAACACCTTGGCGATGCCGGCTACCT CTACGCCGCTGGTTTCGGTGGCCGGGTTTGGTAGTGCGGCAGTGGAGACGGCTCGCCTGGCGGCTTCCCTAACGAATGCTGTCAATCGCCTGGTTCAGAT TGCTGGTAGTGGACCCGGCGCATACGTTGCCACCTTCGCGGTGCTGTCGCTGTATTCCGACCAGGCTGGTAAAGACAGTGACAAGGTTCCTGCCGGCGTT CGCAATGCATTGGCACTGGAGGCGTCCGCTCTGGGGCTTCCTGGCACGGCTGATTTGCAAAGCGTCGCCAAGGTAGGTGGCACGGTTGATATGCCGGTAC GACTCACGAGTGCTGCACAAGAGAGCCCGAGTGGTAAATCGCAGATTGCCGCGATGTTGACCAACGGTGCAACTGTCCCCAAGGGCGTGCCTGTTCGCGC CGCGACCCTCAATGCTGCGACGGGCCGGTATGAGGTGACGGTTCCCGCAAAGTCCACCGTGCCGAATACACCACCGCTGATCTTGACCTGGACCCCTGCC ACCCCTCCAGGAAGCCAGAACCCCTCAAGCACCACTCCGGTCGTACCGCAGCCGGTTCCGGTGTATGAGGGAGCAACGATCACCCCAGTACAGGCCGAGC CGGAGTCCTATCCGGGAGTGCCGTTAGATCTGGACGATCTGATCGTGATCTTCCCGGTGGGCTGGGGGGTTAAGCCAATCTATATAATGTTCAATCATAA CCCTCATGATGTTGTTATTGATGATAAGATCAGAGAGCAAATTCCAATTAGAGGGTGGACTGAGGTTGAAATTAGAGATGTTATCGGAAAAGGTGCAACA GGTAGTTCTTCAGATAAGCGTCGGCCTAATAAGACGATAGATGGGCTGGGGCGGAATGACTCTGCAACAGTATATGGAAGTCCTCCTAATGGATATATAG TTGTGAACGATAGGACAGGTGAAATTATTCAAATTGCAGATCGGAACGATTCCGCATGGGCGGTTGACGGGCGAATCATCTGGAGAAATAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATCAATCCTAATTCTGTCGAAATAGTTGACAATGGCCTAGATTTTTTTTCAAAAGAAGGCAATGGGAAGATGTGGCTAACTACGAAGGCAACTCTGGA AGTCGTATCTTTGGCAACTAAAAAAGGGTTGGCAATTTCAAAAATTGAGGGATTCATCTGGCATAAGGATGTAGGGAGGTTCGAGGCAAGACTTGATGCC ATATTTGAAGGGCTTGTCAATCCAGTAAAAGTGCCTGATGATGTCAATAATAATAACACTAGAGCGAAAGAGAGTACAGAGGAAGATGCTTCTCTTGGGC ATGATGCTTTTATTGTAACAATTGCCTCCAGAAAATAAAGGTGGAAACCTTGGGGCTGAGTTGGCTTGCAATCCCTTGTATGGACTACAAACAATATAGG CTCAGCCCCCTTAGGGATGGTCTGAAGTAGCCATGTCTTTCTGGCCGACTTCAGCCCCCGGCGAATTTGAAAGCGGAGAATCGATTAAAAACGATCCGAT
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| Amino Acid Sequence |
>S-type pyocin protein
MTNNSAPPLVVTRGNDNGYEPGSMVITHVQASGLDIIQYIPGRSSYGTPPFVPPGPSPYVGPGMQEYRRLRDTLDKSHSELKKNLKNKTLKEVDELKSEA GLPVKAVSANDIRDEKSIVDALMDAKAKSLKTIEDRPANLYTASDFPQKSEAMYQNQLLASRKFYGEFLDRHMSELAKAYSADIYKAQIAILKQTSQELE SKARSMEAQAQQVTQQLGADFNAITTPTATKVQQRVKAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQISSSQNLISAAFRNQIALAAQASGE AQVTAFNTKVKQIVNEATAFSTARKQALAQFAANAAAEVETEVNRLTVQVKASPTKAASQAAQATLRQFTESTYAKVNTYAQQTEAALQAKAKEVSAAVA EAQRAATNDLQKTADVVPGQIIQAANTLAMPATSTPLVSVAGFGSAAVETARLAASLTNAVNRLVQIAGSGPGAYVATFAVLSLYSDQAGKDSDKVPAGV RNALALEASALGLPGTADLQSVAKVGGTVDMPVRLTSAAQESPSGKSQIAAMLTNGATVPKGVPVRAATLNAATGRYEVTVPAKSTVPNTPPLILTWTPA TPPGSQNPSSTTPVVPQPVPVYEGATITPVQAEPESYPGVPLDLDDLIVIFPVGWGVKPIYIMFNHNPHDVVIDDKIREQIPIRGWTEVEIRDVIGKGAT GSSSDKRRPNKTIDGLGRNDSATVYGSPPNGYIVVNDRTGEIIQIADRNDSAWAVDGRIIWRNK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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