Strain | Pseudomonas aeruginosa BL10 genomic scaffold adgez-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGGCGCAGGCCGGCTCGTGGCTCCATTTCACCAGCGGCTTGGGCAGTTGTCCGGCATCGACGTTGGCGAGCATCGCCTCGACCCCGATCATCGAGCG CACCTGCTGCCCGGCGGTGATGACCAGGGGGCTATGGGAGTACCAGGCGTTGGTCAGGGCACCCATACCGTTGCCGGTGCCAGCCGCCGCATGCAGGTTG ACGAAGGCCGGGCGGCCGCTGGCCAGGGCGAAGCCATCGGCCATGCCGACCACCGCGCCCTCGTGCAGGCCGAGGATGTAGCGGAAATCCTCGGGGAAGT CCTTGAGGAACGGCAGCTCGTTGGAGCCGGGGTTGCCGAAGACGGTGGTCAGGCCGTGGCGACGGAGGATCTCGTAAGACGCGGAATGGACGGTTTTCAT GCAGGCCTTCAAGCTCGTTTCCTGGATTTGCGCTACTGTTGCAGCCGCTCGATAATCAATCAAATCGATACTCTTTCTATAAAAAATAGAACTGATCTAT
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DNA Sequence for Gene |
>Q064_05290
ATGAGTCCGATCGATCTCAACCTGATCCGCACCTTCGTCACCCTCTACGAAGCCGGCAGCGTGACCCTCGCCGCGGAGCGCCTGTTCGTCACCCAGCCAT CGGTGAGCTACGCCCTGGCGCGCCTGCGCGAACTGTTCGACGACGCGTTGTTCACCCGCACCCGCGACGGCATCCAGCCGACCTTCGTCGCCGAGCAGCT CTACGGCACCTTCCGCGAGTCGCTGACGCGCATCGAGGGCGCGGTACAGAGCGTTCGCCACTTCGATCCGGCAACCACCGAGCGACGTTTCCGCATCGCC CTCACCGATCTCGGCGAAGTGGGTTTCCTCTCGCTGATCCTCGAACGCCTGACCCGCGACGCGCCGTTCGCCGAAGTGGAAGTGCTGCCGCTGCAGGTGG ACGAGGTCGGCGCCTGGCTGAGCAGCGCCAAGGTCGACGCGGCGATCTGCCGCCAGCCGGTGCCCGGCGCGCGCAGCCAGCGGGTCCTGCACGAGCGCTA CGTGTGCCTGCTCAGCGACCGCCACCCGCGGATCGGCGACAGCCTGAGCCTGGAGCAGTACCTGGCCGAGCGGCACATCGTGGTGACCCGTACCTCCGGC CACGGCATCGCCGAGGACGTGCTCGAGGCCATGCAGGTGCAGCGCCGCATCAGCCTGCGGGTGCCGCACTTCTCGGTGCTGCCGAAGATCATTCCCGGTA CCGAGCTGCTGACCATCCTGCCGGCGCAGATCGCCTATCGCTTCGTCGCCGAAGGCGGCATGCGCATGCTCGAACTGCCCTTCACCCTGCCGCCGTTCGA CGTCTCCCTGCACTGGCACGAGAGCAGCGAACGCTCGGCGGCGCTGAACTGGTTCCGCACCACCATCGCCGAGGCGATCATCGCCGCCCAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AACGCCGGCGGCCCTCACGCAGCGTCTCCCAGCGTCGGCGAGCGCTCGCGACGCCGCGCACCGAGCAGCGGCAACACGGCGGCCGCGGCGACGAACACCG CCGCGAACGCCCCATAGAGGGACAGCGGCTGCCAGCCGTCGTCGAGCAGGAGCCCGGCCACCAGCGGCGAGAGGATCGCCCCGCCGCGACCGACGCCGAT CCCCCAGCCGACCCCGGTGGCGCGCACCGAAGCGTCGTAGAGGCTCGGCGCCAGGGCATACAGGCCGGCCACGCAGGCGTTGGCGCAAAGCCCGATCAGC AGTCCCAGCGGCAAGGCCGCGCCGGGCAGCCCGGCGCTCAGCGAGAACAGCGCGAGCAGAGCGGCGGTAAGCAGCATGAACAGCGCCAGCACCCGTTCCA GGCGAAAGCGCGCGGCAAGCCCGCCGAGCAAGGCGGCACCGAAGATCCCGCCGATGCTCAGCAGGGTGCCGCCGGTGATGCCCTGGGCGGTGGACAGGCC
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Amino Acid Sequence |
>LysR family transcriptional regulator
MSPIDLNLIRTFVTLYEAGSVTLAAERLFVTQPSVSYALARLRELFDDALFTRTRDGIQPTFVAEQLYGTFRESLTRIEGAVQSVRHFDPATTERRFRIA LTDLGEVGFLSLILERLTRDAPFAEVEVLPLQVDEVGAWLSSAKVDAAICRQPVPGARSQRVLHERYVCLLSDRHPRIGDSLSLEQYLAERHIVVTRTSG HGIAEDVLEAMQVQRRISLRVPHFSVLPKIIPGTELLTILPAQIAYRFVAEGGMRMLELPFTLPPFDVSLHWHESSERSAALNWFRTTIAEAIIAAQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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