Pseudomonas aeruginosa PAO1, PA2888 (atuC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGTCGCCCGCGAAGTGTTCAACCAGTCGATGAGCAAGACCGGCGGCAGCATCGTCAACATGCTCGCCGACATGTGGGGCGGCATGCCCGGCATGGGT CACTCCGGCGCCGCACGCTCCGGCATGGAGAATTTCACCAGGACCGCCGCCGTCGAGTGGGGCCATGCCGGCGTGCGGGTCAACGCGGTGGCGCCGGGCT GGATCGCGTCCAGCGGCATGGATACCTACGAAGGCGCGTTCAAGGCGGTGATCCCGACCCTGCGCGAGCACGTGCCGCTCAAGCGCATCGGCAGCGAGTC GGAAGTCGCCGCCGCCATCGTCTTCCTGCTCTCCCCCGGCGCCGCCTTCGTCAGCGGCAACACGATCCGCATCGACGGCGCCGCCAGCCAGGGCAGCCGC GCCTTCCCGCTATTCAAGGGCAAGCCGGGACAGAGCCGCGCGTACAACGGCTTCCACCGCGCCTACCTGCCCGACGTACTGAAGGACCAGGAGGACTGAC
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| DNA Sequence for Gene |
>PA2888
|atuC
ATGCCCGCGATCCAGTCGGAACTCGACGTCAACGGCGAGGACTTCGCCCGCAACCGCGAGGCCATGCTCGCCGCCGTGGCCGGCTTCCGCGAGTTGGAGC AGAAGGTCCTGGACAAGGCCGCCGAGGCCAGGCCGAAGTTCGAGAAACGCGGCCAGCTGCTGCCGCGCGAACGCCTGGCGCTGCTGCTCGACCCGGGCGC GCCGTTCCTCGAACTGTCCTCGCTGGCCGGCTACAAGCTGCACGACGACAAGGACGGCACCCAGGCCGGCGGCGGGATCATCGCCGGGATCGGCTACATC GCCGGGGTGCGCTGCCTGGTCAGTGCCAGCAACAGCGCGATCAAGGGCGGCACCATCTCCCCGACCGGGCTGAAGAAGACCCTGCGCCTGCAGCAGATCG CCATGGAGAACAAGCTGCCGGTGGTGACCCTCACCGAAAGCGGTGGCGCCAACCTCAACTACGCGGCGGAGATCTTCGTCGAAGGTGCGCGCGGCTTCGC CAACCAGGCGCGGATCTCCGCCATGGGCATTCCCCAGGTCACCGTGGTGCATGGTTCCAGCACCGCCGGCGGTGCCTACCAGCCGGGGCTGTCGGACTAC GTGGTGGTGGTACGCGGCAAGGCCAAGATGTTCCTCGCCGGGCCGCCGTTGCTCAAGGCCGCCACCGGCGAGATCGCCAGCGACGAGGAGCTCGGCGGAG CCGAACTGCACGCGCAGGTCGCCGGCACCGCGGAATACCTGGCGGAAAACGACGCCGACGGCGTGCGCCTGGCCCGCGAGATCGTCGGCATGTTGCCGTG GAACGCACAACTGCCGGCGCGCCCGGCGCGTTCCTGGCGCGAACCGCTGTACCCGGTGGAGGAGCTGCTCGGGGTGGTTCCGGCCGACCCGAAGAAGCCC TACGACGTCCGCGAGATCGTCGCGCGCATCGCCGACGGCTCCGAGTTCCTCGACTTCAAGAACGAGTTCGACGGCCAGACCGTCTGCGGCCACCTGCGCA TCGAGGGCCACGCCTGCGGCCTGATCGGCAACAACGGACCGATCACCCCGCAGGGCGCGGCCAAGGCGGCGCAGTTCATCCAGCTCTGCGAACAGAGCAA CACGCCGCTGCTGTTCCTGCACAACACCACCGGCTTCATGGTCGGCACCGAGTCGGAGCGCCAGGGCGTGATCAAGCACGGCTCGAAGATGATCCAGGCG GTGGCCAACGCCCGCGTGCCCAAGCTGACCCTGGTGGTCGGCGGCTCCTACGGCGCCGGCAACTACGCGATGTGCGGACGCGGCCTCGACCCGCGCTTCA TCTTCGCCTGGCCGAACAGTCGCACCGCGGTGATGGGCGGTGCCCAGGCCGGCAAGGTGCTGCGCATCGTCACCGAGGAGAAACACGCCAAGGAAGGCAA GGAAGCCGATCCGAAGATGCTCGAGATGCTGGAAACCGTCACCGCGCAGAAGCTCGACAGCCAGTCCACCGCGCTCTACGGCACCGCCAGCCTGTGGGAC GACGGCCTGGTCGACCCGCGCGACAGCCGCAGGCTGCTCGGCTACCTGCTGGATATCTGCGCGGAAGCCGAGGCGCGGCCGCTGAAGGGCAACAGCTTCG GGGTCGCGAGGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGAAACAGGCGAGCCGGCGACAGCCCCTCTCCCCGCTCTCCCTGAAGGAAGAGGGTTGGGAGAGAGCAAGCGGATCCTGCCGGAAAACAATGATGCCCA GGAGGAAAGACAACCCATGATCTTCACCCAGGAACACGAGGAACTCCGCCGCACCGTTCGCAGCTTCGTCGAGCGGGAAATCAACCCCAACGTCGACCAG TGGGAAAAGGACGGCCGCTTCCCGATCCACGAGATCTTCCGCAAGGCCGGCGAACTCGGCCTGCTGGGCATCTCCAAGCCGGAGAAGTTCGGCGGCATGG GCCTGGACTACAGCTACTCGATCGTCGCCGCCGAGGAATTCGGCAGCATCACCTGCGGCGGCATCCCGATGGCCATCGGCGTGCAGACCGACATGTGCAC CCCGGCCCTGGCCCGCTTCGGTTCCGACGAGTTGCGCGAGGAGTTCCTCCGCCCGGCCATCGCCGGCGAGATGGTCGGCTGCATCGGCGTCTCCGAGGTC
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| Amino Acid Sequence |
>geranyl-CoA carboxylase, beta-subunit
MPAIQSELDVNGEDFARNREAMLAAVAGFRELEQKVLDKAAEARPKFEKRGQLLPRERLALLLDPGAPFLELSSLAGYKLHDDKDGTQAGGGIIAGIGYI AGVRCLVSASNSAIKGGTISPTGLKKTLRLQQIAMENKLPVVTLTESGGANLNYAAEIFVEGARGFANQARISAMGIPQVTVVHGSSTAGGAYQPGLSDY VVVVRGKAKMFLAGPPLLKAATGEIASDEELGGAELHAQVAGTAEYLAENDADGVRLAREIVGMLPWNAQLPARPARSWREPLYPVEELLGVVPADPKKP YDVREIVARIADGSEFLDFKNEFDGQTVCGHLRIEGHACGLIGNNGPITPQGAAKAAQFIQLCEQSNTPLLFLHNTTGFMVGTESERQGVIKHGSKMIQA VANARVPKLTLVVGGSYGAGNYAMCGRGLDPRFIFAWPNSRTAVMGGAQAGKVLRIVTEEKHAKEGKEADPKMLEMLETVTAQKLDSQSTALYGTASLWD DGLVDPRDSRRLLGYLLDICAEAEARPLKGNSFGVARF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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