Strain | Pseudomonas aeruginosa BL10 genomic scaffold adgez-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGTCGCCGCGGGTTCCCGCCACCCTCGACAGGCCAGGGTCGAGGCTTTCCGCGCGTGGCGCGGGTTGGTTGCGGTTCGCGCAGCCCAGCGCGGTGGA GATCCCCAGCGCCAGCGCCACGCAACGCAGATGACTGGCAAGCGGCATTGCCCTGCTCCCGTGTCTGAAAGAGCGGGGAACGGTAAGGCAGGCGCGGGCG GCCTGCGCCGGCAAAAGCGCCAGTCATCGTCGCGAAATGGACAGTCGGCGGATTTTTCAGCGTTGTCGCATCAGGTACGGGCCGCAGCCCAGGGCCAGCA GCCCGGCCGGGATGGCCAGCAGGGAGATGCGGGCGATCTGCCGGGAGTAGCGGTTCACCCCGCCTTCGACGAGGCGCAGGCGCTGGAACAACTGGTGGGC TAGCCTGCGCCTTGGCGTGGCCGGGGGCCCGCCTTCAACCTGAACGAAGCGTTTCGCCAGGTGGTCGGAACAACAGGTCCCCGTTCCGGAAGCCGAGTCC
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DNA Sequence for Gene |
>Q064_03942
ATGCCGCTGCGCCGTGCCGTTTTCGCCATCCTTTTCGCGTCCCTGGGCAGTCCTTTGGTAGCCGCCGAAACACCCCTGCGCCTGGAGCGCCTGGAGCGCT GCGGCGATCTCCTGGCCAGCGAGCGGCAGGAGTGGTGCCTGCGCGTGCGCGGCCTGGGCTCCGGCCTGCCGCGCCTGTTGCTGGACGGCCGCGAACTGCC GGCCACCGCCCTGCGGCGCGAGGGCGACGGCCTGCGGCTCCGCCTGGACCGCCGTGGCCACGCCAGCGGTCCGCTTTGGCTGGAGCAGGGCGGGCGCAGC AGCAATCCGGTATGGCTGACCCTGAACGGCAGCCATGTGCTCGCCGCCGGTCCCGACGAGGTGGCGAAGAACATGGATGGCCTGACCACCTACGTCGACC TGGTCAGCCTGTTGATCGAGGAGAACCACGACGGTCGCCGGGAGGCCGAACGCCTGGCCGATAAATATGGCGCGCGGGTGGTCGGCGCGATCCCGCCGTT GAACCTCTACCAGTTGCGCCTGCCGGCGCGCGACCTCGTCCAGCGCGACGCGCTGGTCCTCCGCATCGGCAGCGAGACCAGCGTGGACGCCGTGGTGGTG GAGGAGTCCGCGCCGGAGAAGGGCGAGGAAACCGAGGCGGCGCGCCGGCCCGTGGACAAGCCGGACAGCGACTCCGACGAGTGGGCGGCCAATCGTTTCA TGGACGCGGTGAACTATTACCAGCGTCGGGTCCGCGCCCGCCAGGCGCCGCTGGAGACCCGCCCGGTGCGCATCGGGGTGATCGAGCGCGACGTCGACTT CGACGCTCCCGACTTCGCCGACTACCTCGGCCCCTGCAAGGCGCCCGCACCGCGTACCTGCCTCTACGCGCGCGATGCCGAACGTCCCGACAACCACGGT TCGACGGTCGCCGGCATCCTCGCCGCGCGCTGGGACCAGGGCGGCAACAGTGGTTTCCTGCGTGGGTTGGACCGCGCCAGCCAGGGTTTCGAAGTGATCG TCGAGCGCAATTCGGATGCTGGCATCACGGCCAACGTCGCCGCCTCGGTGAACCTGGTGGAGGATGGCGTGCGGGTGCTCAACTGGAGCTGGGGCATCCA CCGCGTCGGCGCTCGCGACGTCGATGGCGACGAGGTGGATTCGCTGGTGCGCTCGGGGATCGCCATGAGCGGCTACGAGGAGTTGCTCGAGGAGTTCTTC CTCTGGCTGCGCAAGGAGCATCCGGACGTGCTGGTGGTCAACTCCGCCGGCAACGGCTCGTCCTACTCCGGTACCGACGAATACCGCCTGCCGTCCTCCT TCGTTACCGAGCAGTTGCTGGTGGTGGGCGGCCACCAGCGCAGCGAGCGCCAAGGCCTGGCGGTGGACGACCCGGCCTACGCGGTCAAGCGCAGCACCTC GAACGTCGACATGCGGGTGGATGTCACCGCCGCCGCCTGTACCCATGCCTCGACCCTGGAGCGGGACGCGCGGGGCGAGGTGCACTGCGGCACCTCCTAT GCCACGCCGATGGTCGCCGGCACGGTCGCCGCCATGCTTTCCCTCAACCCGCGGCTGCGACCCGAGGAGATCCGCATGCTGCTCCGGCGCAGCGCCATGA CCATCGGCGGCGACTACGATTTCGAGCCGGCCGATGCCGAGGACCTCACCGCACCGATCCTGCCCTCGGAGCGCGGCTACCGCCTGGACCACCGCGACGT CGGCCGCTCGGCGCGGCTGGACATGCAGAAAGCCCTGGACCTGGCGGTGAAGAGCCGCGAGCGCGTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGTTCCGCCGTCCCGGGGCCTCACGGCGAGGCTTCCAGCAGCCGGGCGAGGCGTTCGGCGAGTTCGTTGTGGCGGAACGGCTTGGTCAACACCTCGAA GCCGTTGAGTTGCTCGGGCCTGAGGTTGGCGTAGCCGGTGATGACCAGCACCGGCAATTGCGGGAAGCGCTGGCGCAGTTCCTCGGCAAGCTGCACGCCG GTCTTGTCGGCCATGAGATGGTCGGTGACCAGCAGGTCGGGCGCCAGGCCGCGCTCGACCTCGCCCAGGGCTTCCTCCGCCGACGCCGCCTCGCTGACCT GGTAGCCGAGATCGCCGAGCAGCAGCGCGGTGGTGTAGCGCACCATCCTGTCGTCGTCGACCAGCAGCACGTGGGTCGGCCGCGACGCCTCCGGTGCGTC CGGGCAGCTTTCTGCGGTGGATTGCGTCTGCTCCGCGGTGATCGGCAGCCAGATGCTCACCCGGGTCCCCTTGCCGATCTCCGAGTGGATTCCCAGGCCG
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Amino Acid Sequence |
>hypothetical protein
MPLRRAVFAILFASLGSPLVAAETPLRLERLERCGDLLASERQEWCLRVRGLGSGLPRLLLDGRELPATALRREGDGLRLRLDRRGHASGPLWLEQGGRS SNPVWLTLNGSHVLAAGPDEVAKNMDGLTTYVDLVSLLIEENHDGRREAERLADKYGARVVGAIPPLNLYQLRLPARDLVQRDALVLRIGSETSVDAVVV EESAPEKGEETEAARRPVDKPDSDSDEWAANRFMDAVNYYQRRVRARQAPLETRPVRIGVIERDVDFDAPDFADYLGPCKAPAPRTCLYARDAERPDNHG STVAGILAARWDQGGNSGFLRGLDRASQGFEVIVERNSDAGITANVAASVNLVEDGVRVLNWSWGIHRVGARDVDGDEVDSLVRSGIAMSGYEELLEEFF LWLRKEHPDVLVVNSAGNGSSYSGTDEYRLPSSFVTEQLLVVGGHQRSERQGLAVDDPAYAVKRSTSNVDMRVDVTAAACTHASTLERDARGEVHCGTSY ATPMVAGTVAAMLSLNPRLRPEEIRMLLRRSAMTIGGDYDFEPADAEDLTAPILPSERGYRLDHRDVGRSARLDMQKALDLAVKSRERVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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