Strain | Pseudomonas aeruginosa BL10 genomic scaffold adgez-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCTCGGCCAGCGCTATCGCGAGTTGGTGCGCAGCGTCCATCCTGACCGTTTCGCCGACGCTCCCGAGCGCGAGCAGCGTCTCGCCCTGGAACGCGCGGC GCAACTGAACGAGGCCTACCAGACCCTGAAGAGCGCTCCGCGCCGGGCCCTGTACCTGTTGACCCTGAGTGGTCACGAGTTGCCCTTGGAGGCTACGGTG CAGGATCCGGAGTTTCTCCTGCAGCAGATGCAGCTGCGCGAGGAACTGGAGGAGTTGCAGGACAGCGCCGACCTGGCCGGCGTGGCGACCTTCAAGCGTC GGCTCAAGGCCGCCCAGGCCGAGCTGGAGCGTGAGTTCGCCGCGTGCTGGGACGATGCGCAGCGCCGCGAAGAGGCCGAACGCCTGGTCCGTCGCATGCA GTTCCTCGACAAGCTCGCGCAGGAAGTGCGCCAGCTGGAAGAGCGACTCGACGATTAATCCCTGCGGCCCCCGGGCCGCACCCCATAGTTAAGACAGAGC
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DNA Sequence for Gene |
>Q064_01162
ATGGCCCTACTGCAGATCGCCGAGCCCGGTCAGAGTCCCAAGCCCCATGAGCGTCGCCTGGCGGTTGGGATCGACCTGGGTACCACCAATTCGCTGGTCG CCGCGGTGCGTAGCGGCGTCGCCGAGCCCTTGCCGGATGCGCAGGGACGCCTGATCCTGCCTTCCGCGGTGCGTTATCACGCCGAGCGGGCGGAAGTGGG CGAGAGCGCCCGCGCGGCCGCCGCGGAGGATCCCTTCAATACCGTCATTTCGGTCAAGCGCCTGATGGGGCGCGGCCTGGAGGACGTCAAGCAACTGGGC GAGCAATTGCCCTACCGCTTCCGCCAGGGTGAGTCGCACATGCCCTTCATCGAGACCGTACAGGGGTTGAAGAGTCCTGTGGAAGTCTCGGCGGACATCC TGCGTGAGCTGCGCCAGCGCGCCGAAACCACCCTCGGTGGCGAGCTGGTGGGTGCGGTGATCACTGTGCCGGCCTATTTCGACGACGCCCAGCGCCAGGC TACCAAGGATGCCGCGCGCCTGGCCGGACTGAACGTCCTGCGCCTGCTCAACGAGCCGACCGCCGCCGCCGTGGCCTACGGCCTGGACAAGGGCGCGGAA GGCCTGGTGGCCATCTATGACCTGGGTGGCGGAACCTTCGACATTTCCATCCTGCGCCTGACCCGCGGTGTCTTCGAAGTCCTGGCCACCGGCGGCGATA CGGCCCTGGGTGGCGACGACTTCGACCATGCCATCGCTGGCTGGGTGATCGAGCAGGCTGGCCTTTCTGCCGATCTGGACCCGGGCAGCCAGCGGCAGTT GTTGCAAATCGCCTGTGCGGCCAAGGAGCGTCTTACCGACGAGGCGTCGGTCCGGGTCGCCTATGGCGACTGGAGCGGCGAGCTGAGCCGGGCGACGCTC GACGAGTTGATCGAGCCGTTCGTCGCTCGCAGCCTGAAGTCCTGCCGCCGAGCGGTGCGCGACTCCGGTGTCGATCTGGAAGAAATCCGCTCGGTGGTGA TGGTCGGCGGCTCGACCCGCGTGCCCCGTGTGCGCACGGCGGTTGGCGAGTTGTTCGGCTGCGAGCCGCTGACCGATATCGATCCGGACCAGGTGGTCGC CATCGGCGCGGCCATCCAGGCCGATGCCCTGGCCGGCAACAAGCGCGGCGAGGAATTGCTGCTGCTGGACGTCATTCCGCTGTCGCTCGGCCTGGAAACC ATGGGCGGGCTGATGGAGAAGGTGATTCCGCGCAATACCACCATCCCGGTGGCGCGCGCCCAGGAGTTCACCACCTACAAGGACGGCCAGACGGCCATGA TGATCCACGTGCTGCAGGGCGAGCGCGAGCTGGTGAAGGATTGTCGTTCGCTGGCGCGCTTCGAGCTGCGCGGCATTCCGCCGATGGTGGCGGGCGCGGC GAAAATCCGGGTGACCTTCCAGGTCGACGCCGACGGCTTGCTCGGCGTGTCCGCACGCGAACTGAGTTCCGGCGTCGAGGCCAGCATCCAGGTCAAGCCG TCCTATGGGCTGACCGACGGCGAGATCGCGCGGATGCTCAAGGACTCCTTCGACTACGCCGGCGACGACAAGGCTGCCCGCGCCCTGCGCGAACAGCAGG TCGAGGCGCAGCGGCTGCTGGAGGCCGTGCAGTCGGCGCTGGACGTCGACGGCGAGCGGCTCCTGGACGAAGAGGAGCGCCTGGCCATCGCGGCGCAGAT GGACACTTTGCGTGAACTGGCCGGTGGTAGCGACACCGCGGCCATCGAGAACCAGATCAAGCGCCTGTCCCAGGTGACCGACGCTTTCGCCGCACGGCGG ATGGACGCGACCGTCAAGGCCGCGCTCTCCGGCCGCCGGCTCAACGAAATCGAGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAAGATGCCGCAGATCGTGATTCTGCCCCATGCCGATCACTGCCCCGAGGGGGCGGTATTCGAGGCGAAGCCCGGCGAAACCATCCTGGATGCCGCGT TGCGCAATGGCATCGAGATCGAGCATGCCTGTGAGAAATCCTGCGCCTGCACGACCTGCCACGTAATCGTCCGCGAAGGCCTCGACTCCATGGAGCCGTC CGACGAACTCGAAGACGACATGCTGGACAAGGCCTGGGGCCTGGAGCCCGATTCGCGGCTATCCTGCCAGGCAGTGGTGGCCGACGAAGACCTGGTGGTC GAGATTCCCAAGTACACCATCAACCAGGTGTCGGAAGGCCACTGAGCCCGGCGGTAGTAGAGGAGCGTGCAATGAGCCTGAAATGGACCGATGTGCTGGA AATCGCCATCCAGCTCGACGAAAGCAAGCCGGAGGTCGATCCGCGATACGTCAACTTCGTCGATCTGCGGCGCTGGGTGGTGGAACTTCCAGAGTTCTCC
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Amino Acid Sequence |
>chaperone protein HscA
MALLQIAEPGQSPKPHERRLAVGIDLGTTNSLVAAVRSGVAEPLPDAQGRLILPSAVRYHAERAEVGESARAAAAEDPFNTVISVKRLMGRGLEDVKQLG EQLPYRFRQGESHMPFIETVQGLKSPVEVSADILRELRQRAETTLGGELVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDKGAE GLVAIYDLGGGTFDISILRLTRGVFEVLATGGDTALGGDDFDHAIAGWVIEQAGLSADLDPGSQRQLLQIACAAKERLTDEASVRVAYGDWSGELSRATL DELIEPFVARSLKSCRRAVRDSGVDLEEIRSVVMVGGSTRVPRVRTAVGELFGCEPLTDIDPDQVVAIGAAIQADALAGNKRGEELLLLDVIPLSLGLET MGGLMEKVIPRNTTIPVARAQEFTTYKDGQTAMMIHVLQGERELVKDCRSLARFELRGIPPMVAGAAKIRVTFQVDADGLLGVSARELSSGVEASIQVKP SYGLTDGEIARMLKDSFDYAGDDKAARALREQQVEAQRLLEAVQSALDVDGERLLDEEERLAIAAQMDTLRELAGGSDTAAIENQIKRLSQVTDAFAARR MDATVKAALSGRRLNEIEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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