Strain | Pseudomonas aeruginosa BL11 genomic scaffold adgfL-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGCGTTCATGGACTGCACCCCGCAGTCGAGCCTGGCGGCCTGCAGCAACCGGCCCGGATTGATCGTGCTGCGCTCGTTCGGCAAGTTCTTCGGCCTG GCCGGCGCGCGGCTCGGCTTCGCCCTCGGCGAACGGCCGCTGTTGCAGGCGCTGGCCGAGCAGCTCGGTCCGTGGACGGTCAATGGCCCGGTGCGCCATG TGGCCCAGAGTGCCTTGCGCGACCGCCAGCAACAGCGCCAGCAGCGCGAGCGCCTGCTGGCCGCCAGCCAGCGCCTGGAGGAACTGCTGCGCCGCCACGG CTGGCCGCCGGCGGGCGGCAGCGCGCTGTTCCAGCGCCTGGTCGATCCACGCTGCGCGGCGTTGCACGACTACCTGGCGCGGCGCGGCATCCTCACCCGC CAGTTCGAGCAGCCGGCCAGCCTGCGCCTCGGCCTGCCCGCCGACGAGGCCGCCTGGGCCCGGCTGGATGCCGCGCTGCTCGGCTTCAAGGAGCCTGCTC
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DNA Sequence for Gene |
>Q065_06198
ATGAGTGATCGCGGACGGACCCTGATGGTCCAGGGCACCACCTCGGACGCCGGCAAGAGCACCCTGGTGACCGCGCTGTGCCGCTGGCTGGCCCGGCGCG GCGTCGCGGTGGTGCCGTTCAAGCCGCAGAACATGGCGCTGAACAGCGCGGTCACCGCCGACGGCGGCGAGATCGGCCGCGCCCAGGCGGTCCAGGCCCA GGCCTGTCGGCTGGCGCCGCACACCGACATGAACCCGGTGCTGCTCAAGCCGAACACCGACATCGGCGCCCAGGTGATCATCCATGGCCGCGCGGTGACC AGCATGGACGCCGCCGCCTACCACGACTACAAGCGCGTGGCGATGGAAGCGGTGCTGGCTTCCCATGGGCGGCTCGCCGCCGCCTACCGGGTGGTGATGG TGGAGGGCGCCGGCTCGCCGGCGGAGATCAACCTGCGCGCCAACGACATCGCCAACATGGGCTTCGCCGAAGCGGTGGATTGCCCGGTGATCCTGGTCGC CGATATCGACCGCGGCGGGGTCTTCGCCCACCTGGTCGGCACCCTGGAACTGCTCTCCGACTCGGAGCGGGAGCGGGTCAAGGGCTTCGTCATCAATCGT TTCCGCGGCGACATCGCCCTGCTGCAACCCGGCCTCGACTGGCTGGAGGCGCGCACCGGCAAGCCGGTGCTCGGCGTGCTGCCCTATGTCAGCGACCTGC ACCTGGAGGCGGAGGACGCCATCGACACGCGCCAGGCGGCCAAGGTCGGGCCGCGCCTGAAGGTGGTGGTGCCGGTGCTGCCGAGGATCAGCAACCACAC CGATTTCGATCCGCTGCGCCTGCACCCCCAGGTCGAGTTGAGCTTCGTCGGCCCCGGCCAGGCGCTGCCGTCGGCGGACCTGATCGTCCTGCCCGGCTCG AAGAGCGTGCGCGCCGACCTCGCGGCGCTGCGCGAGCGTGGCTGGGACGAGGCGATCCTCCGTCACCTGCGCTACGGCGGTCGCCTGCTGGGGATCTGCG GCGGCCTGCAGATGCTCGGCGAGCGCCTGCACGATCCGCTCGGCCTGGAAGGCGCGGCCGGTAGCAGCGCTGGCCTCGGCCTGCTGGCGTTGGAAACGAC CCTGGAGGCGGACAAGCAATTGCGCAACGTACAGGGCCGCCTGAGCCTGGAGGATGCGCCGCTGTCGGGCTACGAGATCCATGCCGGAGTCACCCGTGGC GAAGCCCTGGCGCGGCCGGCGGTGGTGCTCGACGATGGCCGCGCGGATGGTGCCCGCAGCGTCGACGGGAACGTCATGGGCACCTACCTGCATGGCCTGT TCGAATCCACCGCGGCCTGTTCGGCGTTGCTGCGCTGGGCCGGCCTGCGCGAGGTCCAGGCGGTGGACTACCAGGCCTTGCGCGAACGCGACATCGAGCG GCTCGCCGACCTGGTCGAGCGCCACCTGGATACCGGGCGATTGCTCGCCCTCTGCGGAGAACCCCATGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTGATCCTTGGCGGCGCCCGTTCCGGCAAGAGCCGCCTGGCCGAGCGCCTGGCCGCCGAGAGCGGGCTGGCGGTGAGCTACATCGCCACCGCCCAGGCC GGCGACGGCGAAATGGGCCGGCGCATCGCCGAGCACCGCGCGCGCCGCCCGGCCCACTGGCGAACCCTGGAGGAGCCTCTGGCGCTGGCGGCGACGCTGC GCAGCGAGGCCGAGGCCGGACGCTGCCTGCTGGTCGACTGCCTGACCCTGTGGCTGACCAACCTGCTGCTCTGCGACGATCCCCAGCGTCTCGACGGCGA GCGCGAGGCGCTGCTGGAATGTCTCGGCGAGCTGCCGGGACGGATCATCCTGGTCAGCAACGAAACCGGGCTCGGCGTGGTGCCGCTGGGCGAACTCAGC CGGCGCTACGTCGACGAGGCCGGCTGGCTGCACCAGGCCATCGCCGAACGCTGCGAACGGGTGACCTTCACCGTCGCCGGCCTGCCCATGCCGTTGAAAG
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Amino Acid Sequence |
>cobyric acid synthase
MSDRGRTLMVQGTTSDAGKSTLVTALCRWLARRGVAVVPFKPQNMALNSAVTADGGEIGRAQAVQAQACRLAPHTDMNPVLLKPNTDIGAQVIIHGRAVT SMDAAAYHDYKRVAMEAVLASHGRLAAAYRVVMVEGAGSPAEINLRANDIANMGFAEAVDCPVILVADIDRGGVFAHLVGTLELLSDSERERVKGFVINR FRGDIALLQPGLDWLEARTGKPVLGVLPYVSDLHLEAEDAIDTRQAAKVGPRLKVVVPVLPRISNHTDFDPLRLHPQVELSFVGPGQALPSADLIVLPGS KSVRADLAALRERGWDEAILRHLRYGGRLLGICGGLQMLGERLHDPLGLEGAAGSSAGLGLLALETTLEADKQLRNVQGRLSLEDAPLSGYEIHAGVTRG EALARPAVVLDDGRADGARSVDGNVMGTYLHGLFESTAACSALLRWAGLREVQAVDYQALRERDIERLADLVERHLDTGRLLALCGEPHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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