Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGGAAGCGTGAAGAAGTCCGCCGATACGCGAACCGGAAGAGGTCGTCATGAGCCTTGTCGCCTGAATCATCCGTGAAGGCGCTAGGGTCGGAAAAGACCG CCCCCGCTGTCAATAGCGGCTATGCGATGAAGCGCGAGCCCAGGCGAGCACGGGCCGAGCGGCCTTTTTCGGGGCGCAAACGAAGAAAGGCGACCCTTTC GGATCGCCTTTCTTGCCCCGCCAGCAGCGCGGGATTTGTTTGGTAGGCACGATTGGATTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACC AACTGAGCTACGTGCCTGCTGATGGCGCGCATTCTACAGACCCCAAAAACACCGTCAAGCTTTTTTTTCGCTAACTCTCTGAAAAAGTGGAATTTTTATT TTCTGGGGGTCCGTTGAAAATTTTGCACGGAGGCTAGCCGGCCGATTTCGACTCGGGTAGCATCCGGGCATCCGTAAAAAATAAAAAACAGAGGTGCAAG
|
|
DNA Sequence for Gene |
>PA2776
|pauB3
ATGCCGCACACCCCCTACCCCTCCTCCTATTACGCCGCGTCGGCCAATCCCGCGCCGCCCCGCCCGGAACTCCAGGGCGAGGTCGAAACCGACGTCTGCG TGATCGGTGCCGGCTATACCGGCCTCTCCACCGCCCTGTTCCTGTTGGAGAATGGTTTCAAGGTCACCGTACTGGAAGCCGCCAAGGTCGGCTTCGGCGC TTCCGGGCGCAACGGCGGCCAGATCGTCAACAGCTACAGCCGCGACATCGACGTGATCGAGCGCACCGTCGGCAAGCGCGAAGCGCAGTTGCTCGGCGAG ATGGCCTTCGAAGGCGGGCGCATCATCCGCGAGCGCGTGGCCCGCTACGGTATCCAATGCGACCTGAAGGACGGCGGGGTGTTCGCCGCCTTCACCGAGA AGCAGATGGATCACCTGCGCGCGCAGAAACAGTTGTGGGAACGCTACGGCCACAACCAGTTGGAGATCATGGACGCCAAGCGCATCCGCGAGGTGGTGGC GACCGACAACTATATAGGTGGCATGCTCGACATGAGCGGCGGCCACATCCATCCGCTGAACCTCGCCCTCGGCGAAGCGGCGGCGGTGGAGTCGCTCGGC GGCAGAATCTACGAGCAGAGCCCGGCGACCCGCATCGAGCGCGGCGCCAGCCCGGTGGTGCATACCCCGCAAGGCAAGGTGAAAGCGAAGTTCATCGTGG TCGCCGGTAACGCCTACCTCAACGGCCTGGTCCCGGAACTGGCGGCCAAGTCGATGCCCTGCGGCACCCAGGTGATCACCACCGAGCCGCTGAACGAGGA ACTGGCCCACAGCCTGCTGCCGCAGGACTACTGCGTGGAAGACTGCAATTACCTGCTCGACTACTATCGCCTCTCCGGCGACAAGCGCCTGATCTATGGT GGCGGCGTGATCTATGGCGCTCGTGATCCGGCGGACATCGAGGCGATCATCCGGCCGAAGATGCTCAAGACCTTCCCGCAACTGAAGGACGTGAAGATCG ACTTCGCCTGGACCGGCAACTTCCTGCTGACCCTCTCGCGCCTGCCCCAGGTCGGCCGCATCGGCGACAACATCTACTATTCCCAGGGTTGCAGCGGCCA CGGCGTGACCTACACCCACGTCGCCGGCAAGGTCCTGGCCGAAGCCCTGCGCGGCCAGGCCGAGCGCTTCGACGCTTTCGCCGGCCTGCCGCACTACCCC TTCCCCGGCGGCAAGCTGTTCCGCGTACCGTTCACCGCCATCGGCGCCTGGTACTACAGCCTGCGCGACAAGCTCGGGGTCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCCGCGTCGACAGAACGGCACCCCGGGGTGCCGTTTTTTCCATCCGCGCCTCAACCTTCGCTACGGATCTGCGCATGACTGATCAGGGCGAAGATCAGGC TACCGCCGACGATGTTGCCGCCCAGGGTAGGCAGGGCGAACTTCAGCAGGAACTCGGCCCAGCCGATTTCCCCGGCGAACGCCAGGTAGCCTACCTCCGC CGAGCCCACCACGATGTGGGTGAAGCTGCCCAGCGCCATCAGGTAGGTGACCATCGCGATGATCCAGATCTTCGCGCCCTCCGCCGCCGGGATCAGCCAG ACCATGGTGGCGATCATCCAGCCGGAAACGATGCCCTTGGCGAACATTTGCGCCAGGTCGTTGTGCATCACCTCGCGGCCGATCTCAAGGAACGCCGCGT CGGCCGCTTCATTGAATATCGGCAGATGCAGCACCGCCCAGGCGAACAGCAGCGTACCGACGATATTGCCGAACAGCACCACGCTCCAGAGACGCAACAG
|
|
Amino Acid Sequence |
>FAD-dependent oxidoreductase
MPHTPYPSSYYAASANPAPPRPELQGEVETDVCVIGAGYTGLSTALFLLENGFKVTVLEAAKVGFGASGRNGGQIVNSYSRDIDVIERTVGKREAQLLGE MAFEGGRIIRERVARYGIQCDLKDGGVFAAFTEKQMDHLRAQKQLWERYGHNQLEIMDAKRIREVVATDNYIGGMLDMSGGHIHPLNLALGEAAAVESLG GRIYEQSPATRIERGASPVVHTPQGKVKAKFIVVAGNAYLNGLVPELAAKSMPCGTQVITTEPLNEELAHSLLPQDYCVEDCNYLLDYYRLSGDKRLIYG GGVIYGARDPADIEAIIRPKMLKTFPQLKDVKIDFAWTGNFLLTLSRLPQVGRIGDNIYYSQGCSGHGVTYTHVAGKVLAEALRGQAERFDAFAGLPHYP FPGGKLFRVPFTAIGAWYYSLRDKLGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|