Strain | Pseudomonas aeruginosa BL11 genomic scaffold adgfL-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGCTGCGGCTCGGCGAGCGCCACGACATCGCCCTGCGCCGCGACCTGTTCCGCTACTACCACAGCGACGCGCAGTCGGCGATCGCCGCCGGCCACGAC ACCCGCGCCGCGCTGCTGGCGTTCGGCTGCGACGCCACCCACGGCTACGAGCGCACGCACATCGACAGCCTCGCCGCGCTGAGCCGGCTGCTCACCGCCT ACATCCTCAGCCCGCCGGTCTTCGCCAGCGACGCCAAACCCCGGGAAACCTCGCTGGAACGCTTCAACAAGCAGCTCGAGCATCCGGTGCACATGGAAAG CTGCACCCACGTCCCGCCGGTGGACGAAGTGCTCGACAGCAGCAACAACAGCGACAAGGACTGAACCCGCGCCGGCCTCCCCGCCCCCGGGGAGGCCGCC CTCCTCTCCAGCCAACTGCTAGGCTGATGGCAGGTTCCCTCGCCTGTCTCGTTTCCTCCGTAGCATCATGCGTGCCGACTCGTGTCCATGGAGTAGTTGC
|
|
DNA Sequence for Gene |
>Q065_01587
ATGTCTCGACTCTGCCTGGTCCTGCTGTTGCTCTGCTGCGCGCTGCCGGCCCGGGCGCAGCCGCCCGCGCCGCTGGACGGAGAGGACCTGCGCCTGTCCC TGGGCGCATACGCCGAGTACTACCGCGACGCCGGCGGCAAGGCGCGCCTGGGCGACATCCTCGCCTTGCCGGCGCAGGCCTTCGCCGCCCTGCGCGGCGA CCACGCGAACTTCGGCAAGAACGCCGCAGCCTGGTGGTTCAGGGTGCGCCTGGACAACCGCAACGGCACCGACCTGGCCGGTTTCCTGGAGATCAACTAC CCGCTGCTGGACGACCTCAAGGTCTACCTGCTGACCGCCGATGGGCGCATCGAACAGCAGGAGAGCGGCGACCTGTTCGCCTTCTCCCAGCGCCCGGTGC AAGTGCGCAACTTCTGGTTCCCGCTGCGACTGCCGCCCGGCGAGAGCACCCTGCTGCTGCGCGTGCAGAGCAGCAGCACCGTCTACGTGCCGCTGTACTT CAGCACCTACGCGGCCAGCGCGGCCAGCCAGGAAACCCTGATGGGCTTCAACGGGGCCTTCTACGGGGTGCTGTTCGGGTTGTTCTGCTACAACCTGTTC CTCTTCGTCTCGCTACGCGAGGCCACCTATGCCTGGTACCTGCTGTACAACCTCAGCCTCGGCCTGTTTTCCGCCAGCTTCGACGGCCTGCTGTTCAAGC TGCTGCCCGGACACGTGGCGCTGGAGTCGGCCGGCATCTACCTGCTGATGTACCTGAGCTGCCTGGTGTCGATCCAGTTCAGCCGCGGCTACCTCTACAC CCGCCGCGACTTCCCGCGCCTCGACCGCTTCCTCCGCGGCCTGCTGCTGGCCTGCGTGGTCCTGTTGGCCAGCGAGCCGCTGGTGGGGCTGCGCGCCTGG AACGTCCTCGCCAGCCTGACGGTGATGCTGGTCTCCCTCAGCCTGCTGCTGGCCGGCGTCCACGTCTGGCGCCAGGGCCTGCGCTACGGCCTCTACTACA TCCTGGCCTGGGGCGCGCTGCTGCTGTCGTTCCTGGTCACCACCGCCGCCTCGCTGGGCTTCGAACTGTTCGGCCTGTTCGGCAGCAGCGTGGTCAAGAT CGGCATGACCGTGGAACTGGTGACCCTGTCCATCGGCCTCGCCGACCGCATCAATGCGCTCAAGGAGGAAGGCTTCCGCTCGCGCCAGGCGGCCGAGCAG GCGCGGGTGGAGAACGAGGCGAAGAGCCGCTTCCTGGCGAAGATGAGCCATGAGATTCGCACCCCGCTGAACGGCGTGCTGGGCATGCTGCAACTGCTCC GCGACACCCCGCTGGACCGCGGCCAGGCGGCCTACGTGGAGACCATCGCCAGCTCCGGCAGCGCGCTGATGTCGGTGATCAACGATATCCTCGACTACGC TCGCATCGAGTCCGGCAAGCTGCACCTGGAGCGCATCGACTTCGACCTGGAGGAACTGCTCTCCGACACCCTGGCGCTGTTCAGCGCCCAGGCCGTGGAA AAACGCCTGCGCCTGCATCTCGGCCTGGACAGGGGCGTGCCGCGCCGCCTCAACGGCGACCCGACGCGGTTGCGCCAGGTACTGATGAACCTGCTCAGCA ATGCCCTCAAGTTCACCGCCGAAGGCCATGTCGCCGTGCGCGTGCAGCGGCGCTTCGACGAGGGCGGACGCGAGCGCCTGCTGTACAGCGTCAGCGACAG CGGCATCGGGATATCCGCCCAGGCGCAGAAGACCCTGTTCGAATCCTTCTCCCAGGCCGACTCCAGCACCACCCGCCGCTACGGCGGCAGCGGCCTGGGC CTGGCGATCAGCCGCGAGCTGGTGCAGATGATGGGCGGGCGCATCGAGGTGAGCAGCGAGCCGGGCAAGGGCACCCGGTTCAGCGTCGACCTGCCGCTCA GCCCCGCCCTCGACGCCGGCGAAGCGGACGAACTGGCGCAACTGCTGCAACACCGCCCGGCCCTGCTGGCCAGCGAGGACAACCTGACCCTGGACTGCCT GCAGGCATTGCTGGAGCGTTGGGGACTGCGGGTCGAACGCTGCCTGCAGCCGAGACGGCTGAACGCCTACCTGGAGGACTTCAGCGCACCGCCCCTGCTG GTCCTGGCGGCGCCCTGGCCGGGGCCGCCGTCGATCTGGCTGGACACCCTCTATGCGCAACTGGAGCAAGGCCAGCGCATCCTCCTGCTATGCCCGCCGC AGCACTGCCAGGACCTGCCGCCGCACGAAGGCCTGCGCCTGCTGGCCCTGGCCCAGCCGGTGGCGGTGAAGGCCCTGCGCGAAGCCCTGCTGGAACTGTA CCGGGAGCGGCGCCGACAGCCAGGGCGGAGCAGCGAGGCGGCCCCGGACGAACGCCCGGACGCCCCATGCATCCTGGTCGCCGAGGACAACCCGGTGAAC CAGCTGGTGGTGCGCGGCTTCCTCGCCAAGCGCGGCTACGCGGTGCGCCTGGCCGGCAACGGACGGCTCGCGCTGGACGAGTACCTGCGCGATCCGAACG GCATCCAGTTGATCCTGATGGATGGCGAGATGCCGGAAATGGACGGCTTCGAGGCGACCCGCCTGATCCGCCGGGAGGAGCGTGCCCAGGGCTGGCCGCG CGTCCCGATCGTCGCCCTGACCGCGCACATCCTCGACGAACACCGCCGGGCCGGAATCGAGGCCGGCATGGACGCCTACCTCGGCAAGCCGGTGGACCGG GCGGAACTCTATGCCACCCTCGAACGCCTGCTCGGCCAGCCTTCGCGACAGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CAGTACGCGATGCGTCGCGCTAGCATTCGCCGCCATACCGGAGTACCGCCATGCTGATCCCCCACGACCTGCTCGAAGCCGACACCCTGAACAACCTGCT GGAAGACTTCGTCACCCGCGAAGGCACCGACAATGGCGACGAGACCCCGCTGGACGTGCGTGTAGAACGCGCCCGGCATGCCTTGCGGCGGGGCGAGGCG GTGATCCTGTTCGACCCGGAGAGCCAGCAGTGCCAGTTGATGTTGCGCAGCGAGGTGCCTGCGGAGCTGTTGCGCGACTAAGTCTCGGCATCGCCCCGCC TGGCGGGGCGGGTTCGCCGCCCTGCACACCCCGGAAACGCCGGACAGCGCCCCTGCTCCGCAGGGCGAATAGCCGCTCGCGGTCATCCGCCGCTCATCCG CGACATCGGCGGATAACGCCCATGGCGTTATTCGCCCTACACACCCCGGAAACGCCGGACAGCGTCCCAGCTCCGTAGGGCGAATAACCGCTCGCGGTTA
|
|
Amino Acid Sequence |
>two-component system sensor/response regulator hybrid
MSRLCLVLLLLCCALPARAQPPAPLDGEDLRLSLGAYAEYYRDAGGKARLGDILALPAQAFAALRGDHANFGKNAAAWWFRVRLDNRNGTDLAGFLEINY PLLDDLKVYLLTADGRIEQQESGDLFAFSQRPVQVRNFWFPLRLPPGESTLLLRVQSSSTVYVPLYFSTYAASAASQETLMGFNGAFYGVLFGLFCYNLF LFVSLREATYAWYLLYNLSLGLFSASFDGLLFKLLPGHVALESAGIYLLMYLSCLVSIQFSRGYLYTRRDFPRLDRFLRGLLLACVVLLASEPLVGLRAW NVLASLTVMLVSLSLLLAGVHVWRQGLRYGLYYILAWGALLLSFLVTTAASLGFELFGLFGSSVVKIGMTVELVTLSIGLADRINALKEEGFRSRQAAEQ ARVENEAKSRFLAKMSHEIRTPLNGVLGMLQLLRDTPLDRGQAAYVETIASSGSALMSVINDILDYARIESGKLHLERIDFDLEELLSDTLALFSAQAVE KRLRLHLGLDRGVPRRLNGDPTRLRQVLMNLLSNALKFTAEGHVAVRVQRRFDEGGRERLLYSVSDSGIGISAQAQKTLFESFSQADSSTTRRYGGSGLG LAISRELVQMMGGRIEVSSEPGKGTRFSVDLPLSPALDAGEADELAQLLQHRPALLASEDNLTLDCLQALLERWGLRVERCLQPRRLNAYLEDFSAPPLL VLAAPWPGPPSIWLDTLYAQLEQGQRILLLCPPQHCQDLPPHEGLRLLALAQPVAVKALREALLELYRERRRQPGRSSEAAPDERPDAPCILVAEDNPVN QLVVRGFLAKRGYAVRLAGNGRLALDEYLRDPNGIQLILMDGEMPEMDGFEATRLIRREERAQGWPRVPIVALTAHILDEHRRAGIEAGMDAYLGKPVDR AELYATLERLLGQPSRQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|