Strain | Pseudomonas aeruginosa BL12 genomic scaffold adgfc-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTTGCGCCTTAGCGGGCCGATGGCTTGCGGCCAGTCCGGACTTTCGCCATCACCGGGAACCAGGATCACCACACCTTCGGCCTCGGCGGTGTTGGCTGG CAACCAGAGGGTGAGGAAGCTTTCGTCGCCGGCCTTGAGGATCTGCTGGCCGTCCTCCGGCAACTGGCGCTCCAGCCCCTTGGCCTCGTCCTGGCTGCGC TCGCTGACCGCCGGGCGTTCCACGGGGGCCTGCGGCTGGTCCTTGGCGGCCTCCTCTTCGGCATGAACGAAAGCCGGCGGCAGGAAAGCGGCGGCCAATA GCAGCGGCAGCAGGGCGGAGGGCTTCGGCAGTAGAGAGAAGGCCGGCATTGGAAATTCCCGATAGACAATCCAGAAGGCAGCCTAAACCCAGAGCACTTC TTTGTCAGGCCGAGCCTTCGCATGGTTCGCCGGTCGCGCTCGCGGTAAGGTATGCCCGCTTTTCCTTCCGTTGCGGTGTATTCCGTGGAGTGTCGCCGGC
|
|
DNA Sequence for Gene |
>Q066_05187
ATGTTGCGTCGTTGCTGTCTGCTCTTCTTCTGTCTGCTGTTGAGCCTGCCCGTGCGAGCGGAGGAGTCGGTCGCCTTGCCGCTGGCGGCGGAGTTACGGA CCTGGCTGGCGGAGCATCGGGAATTGCGCGTCGGGGTGGTCACCGAAGCGCCCTATGCCCAGTACGACCGCCGCCTGCAACAGTATTCCGGGGCCAACGT GGAGCTGATGGGCTGGCTGGCCACGGCAATGCAGGTGACCTTGCGGTGGCAGGGCTATCCCGACCAGGCGGCGCTCGACGATGCCCTGCGCGCTGGGCGC GTGGATATCGCTCCCGGCCTCAGCCAGACCCCAGCCGGGCTGCGCTTGTGGCTGTTCTCCGATCCCTACCTGCGGGTTTCCCGGCTGGTGGTGGGGAAGC GCGATGGCAGCGGCAGCGTCGAATTGGAGCAACTGGAGCGCGATACCCGGGTTGCCGTGCGGGCCGGCAGTTCGGTAGCTGACTACCTCAGCAGCACCTA TAGCGGCCTGCAGTGGGTGTCGGCCGATTCCGAACGCGAGGTGCTGCGCGCCGTGCTCGCCGGACAGGCACGCTACGCGGTGATCGACGAAGCGCAACTC AGCCGCCTGACCCGCGAACCGGAGTTCGCCGAGCTAGCGGTGGTTGGCGATATCGGCTACCCGCAGCTGCTGCGGGTGGCGACCCGTCGCGACTGGCCGG AACTGGCGATGGTGGTCGACCAGGCGTTGCGCTCGCTGCCGCGCAAGTCCCTGGACCAGTTGCACGAGCGCTGGTTGCAACCCAAGTATCCGCGCCTCGG CGAGTCGCCGGGGTTCTGGCAGAACCTGTCGATCCTCCTCGGCCTGCTGCTGGCCGGCGCGCTGGCGGCGGTGTTCCTCCAGCGGCGCCAGCAGCATGCG CTGGAAGCCCGGCTGTACGGCGCCCGCCGCGACCTGGAGCTGCGCCAGGCGGCCGAGGAGGCGCTGCGCCTGACCCAGTTCTCCATCGACAACAGCACCC TGGGCATCCTCTGGGTCAACTGGGACAGCCGCGTACGCTACGCCAACCGCGCCGCCGAACAGATGCTCGGCCATGCCGACGGTCAACTCGTGGACCGTCC GCTGGCCGACTTCGAGCCCGGCCTGGACATGGACCGCTGGTTGAATCTTTGGCGTCGTGCGCGCAATAGCGAGGAGGGCCCGCTCAGCTTCGAGACCCGC TGCCTGCGCGCCGACGGCAGTTGGCTGCCGGCCGACGTCTCGCTTAGCTTCCTGCGCTTCGGCACGTCCGAGTATCTGGTGGTGTTCCTCAGCGACGTCA CCGAGCGCCGCCGTGCCCGCGAGGCATTGCAGGAAAGCGAGGCGCGGATGAAGGGCATCGCCTCCAACGTGCCGGGCATGGTCTTCCGCCTGGAGCGCCC GCGGGCCGGCGCGTTTTCCGACTTCGCCTATATCAGCGAGGGCAGCGAGGCGCTGGTCGGCTACAGCGCTCGCGAACTGATCGAAAGCGGCCGCGGCATT CGTGGCCTGGTCCATCCCGACGACCGCGAGCGCTACTGGTCGAGCCAGATGGCTGCCCTCGACGAGAATCGCGACTGGCATTGGCAGGGCCGCATCCTCA CCCGCCAGGGCGAATTGCGCTGGGCCGACATCAAGGCTTCGGCGCGCTGTTTCGAGGATGGTCGTGCGGTCTGGGACGGGGTGGTCTGGGACATCACCGC GAACAAGCAGATCGAACTCGAACTCGGCGAGTCGCGCGCCCAGCTCCGCGAGCTGTCGGCGCACCTGGAGTCGGTGCGGGAGGAGGAGAAGGCGCGTATC GCCCGCGAGGTCCATGATGAGCTGGGCCAGGTGCTGACGGTGCTGAAGCTGGAAACCTCGATGTGCGAGCTGGCCTATGCCGATGCCCAGGAGGGCCTGC GCGAACGCCTGGGCAACATGAAAAAGCTGATCGCCCAGTTGTTCCAGCTGGTGCGCGACGTGGCTACCGCACTGCGCCCGCCGATCCTCGACGCCGGAAT CGGCTCGGCGGTGGAGTGGCAGGCGCGGCGCTTCGAGGCGCGCACGCAGATTCCCTGCCTGGTGGAGGTGCCGGAGAACTCGCCGCAGTTGGTCGACGCC AAGGCTATCGGCCTGTTCCGCATCCTCCAGGAGGCGTTGACCAATGTCATGCGGCATGCCGAGGCGCATACTGTGCAACTGCGTCTGCTGCGCGAGGGCG ACGAGCTGTGCCTGAACGTCAGCGACGACGGTCGCGGGTTCGATGTTGCCACGGTGGGGCGTGGCAGTTCCTTCGGCCTGGTCGGCATGCGCGAGCGGGT GCTGATGATGGGCGGTACGCTGGACATCGACAGTGCCCCCGGCGAGGGCACCACGCTCAGCGTGAGGATTCCGCTGGGCGTCGCGGGCCCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CAAGAACAACCGCCGACAAGGCGGAACAGCGTGAGGCAGCAAAGAGTGGTGATCCGAGTCCTGGTCGCTGAAGACCACACGATCGTCAGGGAAGGCATCA AGCAACTGATTGGCATGGCCAAGGACCTGCAGGTGGTCGGCGAGGCCACCAATGGCGAGCAGTTGCTGGAAACCCTGCGCGGAACGCCTTGCGAGGTGGT CCTGCTGGATATCTCCATGCCTGGCGTCAATGGCCTCGAGGCGATTCCGCGGATTCGCGCGCTGAACGAGCCGCCGGCGATCCTGGTGCTGTCGATGCAC GACGAGGCGCAGATGGCCGCCCGCGCCCTGAAGATAGGTGCTGCCGGCTATGCCACCAAGGACAGCGATCCGGCATTGCTGCTCACCGCGATCCGCAGGG TCGCCGGCGGCGGACGCTACATCGACCCGGACCTTGCCGATCGGATGGTCTTCGAGGTCGGCCTGACCGATTCGCGTCCGCCCCATGCGCTGCTTTCCGA
|
|
Amino Acid Sequence |
>sensor histidine kinase
MLRRCCLLFFCLLLSLPVRAEESVALPLAAELRTWLAEHRELRVGVVTEAPYAQYDRRLQQYSGANVELMGWLATAMQVTLRWQGYPDQAALDDALRAGR VDIAPGLSQTPAGLRLWLFSDPYLRVSRLVVGKRDGSGSVELEQLERDTRVAVRAGSSVADYLSSTYSGLQWVSADSEREVLRAVLAGQARYAVIDEAQL SRLTREPEFAELAVVGDIGYPQLLRVATRRDWPELAMVVDQALRSLPRKSLDQLHERWLQPKYPRLGESPGFWQNLSILLGLLLAGALAAVFLQRRQQHA LEARLYGARRDLELRQAAEEALRLTQFSIDNSTLGILWVNWDSRVRYANRAAEQMLGHADGQLVDRPLADFEPGLDMDRWLNLWRRARNSEEGPLSFETR CLRADGSWLPADVSLSFLRFGTSEYLVVFLSDVTERRRAREALQESEARMKGIASNVPGMVFRLERPRAGAFSDFAYISEGSEALVGYSARELIESGRGI RGLVHPDDRERYWSSQMAALDENRDWHWQGRILTRQGELRWADIKASARCFEDGRAVWDGVVWDITANKQIELELGESRAQLRELSAHLESVREEEKARI AREVHDELGQVLTVLKLETSMCELAYADAQEGLRERLGNMKKLIAQLFQLVRDVATALRPPILDAGIGSAVEWQARRFEARTQIPCLVEVPENSPQLVDA KAIGLFRILQEALTNVMRHAEAHTVQLRLLREGDELCLNVSDDGRGFDVATVGRGSSFGLVGMRERVLMMGGTLDIDSAPGEGTTLSVRIPLGVAGP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|