Strain | Pseudomonas aeruginosa BL12 genomic scaffold adgfc-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGCGAGCAACTCGCGGGCGCTCTGCCAGACCAGCTCGGGAGTTGGCAGCACCTGGGCCGACATCCAGTGGCGATGGCTGGCGACCCACCACAGCAGC GCCAGCCCGAGCGGCAGCAACCAGGGCAGCAGGCCGTCCCCCAGGCGCCGGGCGAAAGCCGCGGAGGGCGGCGGCGCCAGGCGCGGCAGGGGCCGGCTCC AGGCGGGCGAAAGGGTTTTATCGATATTCTTCATGGGAATATAAATCGCCGAATCAATGCATTTTTTCGCTAAGAAGGGCCATTTAAAGAAAGGCACCAG GCAGCGGCAAATGCATTTGGAGAATATTTTCCATGCTCTGGCTGCATATGACGCGGAGAGGCCCGTGCGGCCTGTCATACTGCTTTTGGTTATAAAAAAA TGAATTTTTATTATTTATTTTCGAGGCGCCGCTGTGCATAGCTAGCCGCACACCCGCTCCCGGCGGGAATCCCTCTCTTCCCGTTCCAAGGAGCCGCCCC
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DNA Sequence for Gene |
>Q066_04700
ATGAAAGCGCTTACGTCTTCCCTGCTCGGTCTGTTCGCCGCGCCTGTGCTCGCCGGCCTGCTCGGTGCCTACGTGCCGCTGGCGAGCGCCGCTCCGCCGA AGGAAATCCGCATCGCGGTGCCGGACGTCAGCGCCGGCAGTTCGCACTCGGGCGGCGGCGTGGTCGACGTGCTCTACACCCGCCAGTTGCTGGAGAAGGA GTTCGCCAACGACGGCATCGCGGTGAAATGGAGCTTCTTCAAGGGCGCCGGCCCGGTGGTCAACGAAGCGTTCGCCAACGGCCAGGTGGACTTCGCCTAC CTCGGCGACCTGGCGGCGATCATCGGCAAGTCCGGAGGCCTGGACAGCCGCCTGCTGGCCGCTACCGCGCGAGGGGTCAACCACTATCTCGGCGTGCAGC CGGGCTCCGGGATCAAGACCCTGGAGGATCTCAAGGGCAAGCGCGTAGGCATCTTTCGTGGCACCGCCAGCCAGTTGTCGTTCGACAATGCCCTGGCCAG CGTCGGTCTCAGCGAGAAGGACCTGAAGGTGATCAACCTCGATTTCAGCGCCGCCCTGTCCGCCCTCGCAGCCAGGCAGATCGATGCCACCTGGGGCCTG GCCGGACTGTTCGCCCTGCGCGACCGCGGGCTCGCGGAAATTCCGCTGAGCACCCGCGACCTGAACGGCGCCGGCACCCTGCAGGCGCTGCTGGTCGGCT CCGGAGCCTTCGTCGATGCCCATCCGGACATCACCGAGCGGCTGCTCAAGGTGCAGTTGCAGGCCCAGGACTGGCTGGCCCGCGAGGAGAACCGCGACGC CTACATCGAACTGGTGTCGAAGCAGGCCAGCTACCCGGTGGTGATCCTGCAGAGCGAGTACCGTGGCCGCAAGCTGGGCGACGCCCTGTCGCCGCGCCTG GACGCCGATTTCCTTGGCCGGCTGGATGCTTCGATCCAGGCGGCCAAGCGTTTCGGCCTGATCCGTCGCGAATTCAGCGCCGAGCAGTGGGCCGCGCCGG AACTGCTGGAGGCGGCCGGCAAGCTGGCGAAGGCCAAGGCCGTGGCGCAGGCGGCGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCGAGCCGGGGACGGCCGAGGCGGCGCCGTTTCGTAGCAATTTGTAATATGTTTCGAGATTCTTGCACCGACCCAACCAATGACTGGATCGAGCGAAG TATCCAGCCGTTGGTCGGGGATTCTGCGTATATCGCGTCATGAAAGTTTCACGCGGGTAATCCGCAGGTTATTCCGCGATCATTTCGTTCGTTAATCGCC CCATATATTCAGATACAAAATCGGCACTGCCAATTCTTCCAGTTTTCCCTTCCGACAATTCTCCCGACCCTCCCCGGAAACAACTCCAAGTATCTCGCGG CGAACCGCCGCGTCCCGCATCTAGCCTGCCCATCACTACGACAGCGCGGCGCCAGCGCCGGGCCTCGCCCTGCGCGTCGGCGGCATTCCTGATTTTCTTC CGGAGGAGAGCGGTCATATGAATCTCGATAGCAAATTGTTCGACGCGACACTCGATCTCGAACGCGTGAAAGTTTCGGTGAGAACGCTGGTGAAGTTATC
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Amino Acid Sequence |
>nitrate ABC transporter substrate-binding protein
MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAY LGDLAAIIGKSGGLDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLSFDNALASVGLSEKDLKVINLDFSAALSALAARQIDATWGL AGLFALRDRGLAEIPLSTRDLNGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVVILQSEYRGRKLGDALSPRL DADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAGKLAKAKAVAQAAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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