Strain | Pseudomonas aeruginosa BL12 genomic scaffold adgfc-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCACGCGGCCGTCCTCGCCTCGGTAGAAAACCATCGGCTCGTCGCAGATGCGTCGGCCGAGCGGCTTGCCGGCCAGTTCGTCGGGGGTGCAGGCCACG TACCAGGCGTTCTTCGGAAACATCGTCGGATCCTCTCGTTGTTCTTGTAATTGGATCCAATGATTCGCGAGGCAACTTTTCCAAGTCAACCGCTTCTGTA CAAAAAATAATCCGTTCGATAGTCGCACATAAAAAAATTCAGGAATAAATCGCTCAATTATCTCGTTCCAGAGCATTTCTCAGATTTCGCTGACAGTGGG ATATCCACTGGCCATCCGTTTTCTTGTCGCACAAATGGATCCAATAGAATTGCGGCATCGACGCAACGGTGCCAGGGTGCCTGCGCTTGCCGTGCCTACA ACAACAAGAAAAGGGTCTTCCCGATGATGGATTCCTGCATTCCCGCGCCTCGCTCCCGCCTGCCGTCGCTTCTTTCCTGTCCGCTCGGGGAGGGCCGCCC
|
|
DNA Sequence for Gene |
>Q066_02941
ATGAACCGGGACTTGCGCCGCGCTCTCGACGACGAACCGATGCGGCCGTTCCAGTGGCTGGCGGTGGCTGTGTGCATCGTGCTCAACCTGATCGATGGCT TCGACGTGCTGGTGATGGCCTTCACCGCATCCTCGGTGGCCGCCGAATGGAACCTTGGCGGCGCCGAGATCGGCCTGCTGCTCAGCGCCGGCCTCTTCGG CATGGCCGCCGGCTCGCTGTTCATCGCGCCCTGGGCCGACCGCTGGGGGCGCCGCCCGCTGATCCTCGCCTGCCTGGCGCTGTCGGGCCTGGGCATGCTC GCCTCGGCGCTGAGCCAGGCGGCCTGGCAACTGGCGTTGCTGCGCGGGCTGACCGGACTGGGTATCGGCGGCATCCTCGCCAGCAGCAACGTGATCGCCA GCGAGTACGCCTCGCGCCGCTGGCGCGGCCTGGCGGTAAGCCTGCAATCCACCGGCTACGCGCTCGGCGCGACCCTTGGCGGACTGCTCGCGGTATGGCT GATCGGCGCCTGGGGCTGGCGCTCGGTGTTCGTCTTCGGCGCTGGCCTGACCCTGGCGGTGATCCCGCTGGTCTGCCTGTGCCTGCCGGAGTCGCTGGAC TTCCTCCTGGCGCGCCGGCCGCCGCGGGCGTTGCAACGGGTCAACGCGCTGGCCCGGCACCTGGGCCGCGCGGCGCTCGCCGAACTGCCGAGCCCGCCCG GTGGCGGAGCGGAGCACGGTAGCCGCCTCGCCCGGTTGCTTTGCGTTGCCCAGCGACGTACCACGCTGCTGCTCTGGGCGCTGTTTTTCCTGGTGATGTT CGGCTTCTACTTCATCATGAGCTGGACGCCGAAGCTGCTGGTCGCCGCCGGCCTGTCCACCGCCCAGGGCATCACCGGCGGCACCCTGCTGAGCATCGGC GGGATCTTCGGTGCCGCCTTGCTCGGCGGGCTTGCCGCGCGCTTTCGCCTGGAACGGGTGCTGGCGCTGTTCATGCTGCTTACCGCCGCTCTGCTCGCGC TGTTCTCGCTGAGCGCCGGGCTGCCCGGCGCGGCCTTGCCGCTGGGGCTGCTGATCGGGCTTTGCGCCAACGCCTGCGTGGCCGGCCTGTATGCCCTGGC GCCGAGCCTCTACGACGCTTCGGTGCGTGCCACCGGGGTCGGCTGGGGGATCGGCGTCGGTCGCGGCGGGGCGATCCTCTCGCCGCTGGTGGCCGGGCTC CTGCTCGACGACGGCTGGCAGCCGCTGTCCCTCTATGGGGCGTTCGCGGCGGTGTTCGTCGTCGCGGCCGCCGTGTTGCCGCTGCTCGGTGCGCGGCGTC GCGAGCGCTCGCCGACGCTGGGAGACGCTGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGGCCGCCGGCGTTTCAGCGTTGGGCGGCGATGATCGCCTCGGCGATGGTGGTGCGGAACCAGTTCAGCGCCGCCGAGCGTTCGCTGCTCTCGTGCCAGT GCAGGGAGACGTCGAACGGCGGCAGGGTGAAGGGCAGTTCGAGCATGCGCATGCCGCCTTCGGCGACGAAGCGATAGGCGATCTGCGCCGGCAGGATGGT CAGCAGCTCGGTACCGGGAATGATCTTCGGCAGCACCGAGAAGTGCGGCACCCGCAGGCTGATGCGGCGCTGCACCTGCATGGCCTCGAGCACGTCCTCG GCGATGCCGTGGCCGGAGGTACGGGTCACCACGATGTGCCGCTCGGCCAGGTACTGCTCCAGGCTCAGGCTGTCGCCGATCCGCGGGTGGCGGTCGCTGA GCAGGCACACGTAGCGCTCGTGCAGGACCCGCTGGCTGCGCGCGCCGGGCACCGGCTGGCGGCAGATCGCCGCGTCGACCTTGGCGCTGCTCAGCCAGGC
|
|
Amino Acid Sequence |
>MFS transporter
MNRDLRRALDDEPMRPFQWLAVAVCIVLNLIDGFDVLVMAFTASSVAAEWNLGGAEIGLLLSAGLFGMAAGSLFIAPWADRWGRRPLILACLALSGLGML ASALSQAAWQLALLRGLTGLGIGGILASSNVIASEYASRRWRGLAVSLQSTGYALGATLGGLLAVWLIGAWGWRSVFVFGAGLTLAVIPLVCLCLPESLD FLLARRPPRALQRVNALARHLGRAALAELPSPPGGGAEHGSRLARLLCVAQRRTTLLLWALFFLVMFGFYFIMSWTPKLLVAAGLSTAQGITGGTLLSIG GIFGAALLGGLAARFRLERVLALFMLLTAALLALFSLSAGLPGAALPLGLLIGLCANACVAGLYALAPSLYDASVRATGVGWGIGVGRGGAILSPLVAGL LLDDGWQPLSLYGAFAAVFVVAAAVLPLLGARRRERSPTLGDAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|