Strain | Pseudomonas aeruginosa BL12 genomic scaffold adgfc-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATCTCCAACAGCATGGACACGGCGTTCTGCGTGGACTGTCTACAGGAAGCATTGGATCAGCATGGATGTCCGGAGATCTTCAACAGCGATCAGGGTTCT CAGTTTACGAGCGAGGCCTTCACCGGCGTGCTTAGAGTTGCCGGGATCGCCATCAGCATGGACGGGCGTGGGCGTGCGCTGGACAACATCTTTGTGGAAC GGCTCTGGCGTAGCCTCAAGCACGAGGACATCTACCTGAAGGGCTACAGTACGGTGGCTGAGCTCACGCTCGGACTGGTCGAATACTTCGCGTTCTACAA CGGCGAGCGGCCCCATCAGGGACTGGGAAACCGCACTCCTGACGAGGTCTATGCCGATGGTATTGGCGGCGGCGCCAGGATTGCTAATCACTTTGACCGG GACGGAAATCCTTCCAGCCCGGTCGCATCGGGGCAGCGCCGTTCGGCTGCAGTAGAAGCAATGGATTTAGCTTAAACCCGGATGAAATCTGTCTTGACAG
|
|
DNA Sequence for Gene |
>Q066_01624
ATGGGTCCACTTTACCTCGGCGAGGCGCTGCGCATCGGCCTCAGCTATCCGGTCTTGCTCGGCACCTACTTCCACCTGTCGCTGGAAGTCGCCGACGGCC GCGCCTGGCTGGTGGCCACCGGCTACGGCGAGGACGAGGCGCTGCGGCCATTCAACACCGAGCTTTGCCTGGGCTCGCTGAAGGTCACCTGCGCCGACCT GCTCGGCCAGCCGCTGCCCTTGCTGGAAGCGGCCTTCGACTATGCCGGCGACGAGGCGATGGCGCGGGCCTACGCCGAGGGTTTCGCCTGCGAGTTGCAC TTCGAACGCGAGCGCAGCGCCATCGGCTTCGCCGCCGAATGGCTGGAGCGCCCGTTGCCGCTGGCCGACCCGGTGACCCACCGGGAGATGCTGGAACAGT GCCGGCGGCAGAACATCGACCTGGCCGCGCGTCGTGCCTGGCTGGACAAGGTCCGGGCGATCCTCGCCGAGCGCTTGCAGGACCCGCCCGGCCTGGAGGA ACTGGCCAGGCGCCTGAACTGTTCGTCGCGCAGCCTGCGCCGGCACCTTCAGCAGCAGCGCACCAGCTACCAGCAATTGCTCGACGAGTTGCGCTTCGCC CGCGCCAAGGAGTTGTTGCAGAGCGGCGACATGCCGATCTACCGGATCGCCGAGGAACTCGGCTTCAGCGAGACCGCCAGCCTGCGCCATGCCTTCCAGC GCTGGAGCGGCCAGCCGCCGAGCCATTTCCGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGCTCGCTCAGGCGGAGGGGCTGGTGTCGGCGTGGCGCCGTCGCCGTTCGTCCGCCACCTCACTCAGGGATTTTGCCGCGCCGTCGCCAATCCAGGCCA TGAAGGCACGATCGAAGCGGAAGTCGGCGCCGCGCAGCCCGACGAGGAAGCGCCGTACGTCCTGGGCGTTGCGCTAGTCGCGGCACACTGCGGTGTCGCG GGTGATGGTGTCGCCGTGCCAGCCGAAGACCATCTGTCGTTTCTCTGCGCGCGCTGGAGCGGGCAGGCCAACGATGGCCTGCCCACGGGCCGTCAGGATG CCGGCTCTTCGATCAGCCGGTCATAGGGCGGCAGGCCGCTGTATTGGCCCAGGGCTTGCTCGTAGGCGTTCTTCAGGTCGTCGGCGGCGAGGTCGTAGCC GACCAGCAACTGTTCGAGTTCAGCGGCGTTCTGCGGGTCGTCGTTCTGCAACTGCGCGTCGAGTTCGCGGGTGCGCGCGGCGACGCACTGGATCGCCACC
|
|
Amino Acid Sequence |
>AraC family transcriptional regulator
MGPLYLGEALRIGLSYPVLLGTYFHLSLEVADGRAWLVATGYGEDEALRPFNTELCLGSLKVTCADLLGQPLPLLEAAFDYAGDEAMARAYAEGFACELH FERERSAIGFAAEWLERPLPLADPVTHREMLEQCRRQNIDLAARRAWLDKVRAILAERLQDPPGLEELARRLNCSSRSLRRHLQQQRTSYQQLLDELRFA RAKELLQSGDMPIYRIAEELGFSETASLRHAFQRWSGQPPSHFRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|