Pseudomonas aeruginosa PAO1, PA2677
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCAACGCCAACTACGTGAAGAAGCTGGTTTTTCCCCTGGAGATACTCCCCCTCACACCGCTGCTGGCCGCTTTCTTCAACGCCATGCTCGGCTACCTG GTGCTCTGTATCTTTCTTCTCTTCAGCGGCGTCGAGCCAGGCTGGCAACTGGTTCTGCTACCGCTTGCCCTGCTCCCCTTCCTGCTCTGCGTGACGGGGC TGGCGTGGTTCCTCGCGGGGCTCGGGGTCTATGTTCGCGACATAGGGCAGTTCGTCCAGTTTCTCCTGGTGCTTCTGCTATTCATCAGCCCGGTGTTCTA TCCGCTGTCTTCCTTGCCACCGGTAATGCAGCCCTACCTGTACCTCAATCCGCTGACGATCCCGGTGGAAATGGTCAGGGCGATCCTTTTCGATGCTCCC TATCCGACCCTTGGGGTCTTCAGCGTTTATTGCGTTGCGTCTCTGCTGGTCTGTTCATCGGGCTTCCTCTGGTTCCGTCGGGTTCAGGAAGGTTTTGCAG
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| DNA Sequence for Gene |
>PA2677
ATGTCCTCTGAGGCCGTTTCCCCGGGCCCGCAGATGACGGCCGAGTGGATACCGCTGGGGCAGCGTTTGCTCGAACGCGGGTTGGTGAGCGGCCAGGAAC TCGAGCGGGCGCTCGACCTGCAACGCCGGCTTGGCGGCCGTCTGGGAGGCATTCTCGTGCGTTCCGGAGCCATCTCGGAAAATACCCTCATGCAGGTGCT GGCGGAGCAACTGCGGTTGCCGCTGGTGGGGGACGACCTGCGGAAGCCGAGCGAAGAGTCCATCGCCGCATTCCTGCTCAGTACCCCGATCAATACCGAC TGGTTCGTCGAAGAGCAACTGGTGGTCTGGGAGGAGGGCGAACAACTGCTGTTCGCGGCGCGTGATCCGTTATCTCCTTCGATACGCGAAACCCTGGGCT ATTTCTATCCGGAGCGCTCGATTCAAGCAGTGCTGTGCCGCTCCCAGGATCTGGACGGCTGGTTGGAGCACTCCCTGGACCTGGCCCGGCAAGGTGCGGA TCGGCACGCCTACGGCAGCGAAGACATCCGCTACCTGCGGGAGCTGGCGGAGGAGGCGCCGGTAGTCGAACTCGTCAACAACGTGATGAGCCAGGCCATG GAAAAGCGTTCTTCGGATATTCACATCGAACCCCGGGAGTTCGACTTCCGTATCCGCTTCCGCGTCGACGGCGTCCTGCACGACCAACTGAGCCTTCCCC GCGAGCGATTCGCGGCGGTCGTCTCGCGGATCAAGCTGATCTCCGCCATCGACATCGCGGAGCGACGGTTGCCGCAGGATGGACGCATGAGCATCCGGGT CAGCGGTACGGAGCTCGACGTGCGGGTCTCCACCTTGCCAGGGGTGCATGGCGAATCGGTGGTCATGCGCCTGTTGCCGAAGGAGCGCGAGGGGTTGCGC CTGGACCGGCTCGGGATGCTCCCGGACCACTTGCGGAGGATGCGTGCATGGGTAGCGGAACCCCACGGCATCATCCTGGTGACCGGCCCCACCGGATCGG GCAAGTCCACCACGCTCTATGGCGCGCTGGAGGAAATCAATGATGGCGTGCGCAAGCTCATCAGCGTGGAAGATCCCGTGGAATACCAGGTGCCCAATAT CACCCAGGTCCAGGTCCATGCCGACATCGGCCTGACCTTCGCTGCCGCCTTGCGCTCGATCCTGCGGCAGGATCCCGATGTGATCATGATCGGGGAGATA CGCGACCTGGAGACGGCGGAGATCGCCGTACAGTCCTCGCTCACCGGTCACCTGGTGCTTTCGACCCTGCATACCAACGATGCGGTGAGCGCCTTCACGC GTTTGATCGACATGGGCGTGGAACCCTTCCTGGTGGCTTCGCCGGTGCGCGGTGTCCAGGCCCAGCGACTGGTGCGCAGGTTGTGCGCCCACTGCGCGGA ACCTTGCGAGCCAACCCTTGCTGCGGCCGATCTGGCAGCGACCGAGGCGGCCACCGCGCGGCTGTTCCCGGGGCAGGCAGCGCAATGGCGCGTGGCGCGA GGCTGCGGCCGCTGCGAAGGTACCGGCTACAGCGGCCGTGTGGGCATCTACGAACTCGTCGATCTGTCTTCCGAGATGCGCGACCTGATCGTGCAGAGAG CTTCCCTCGAACAGATGCATCGGCTTGCCGCCAGCCAGGGACAGCGCAATCTGCGTGAAGATGGCTTGATCAAGGCCTGGTTGGGTATGACCAGTCTTGA CGAGGTGCATCGCGTGACCAGCGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCCATGAATTTCATCTACCAAGCCGTCGATCGCAAGGGCAGGCGCGTTCGTGGCGAACTCTGCCTCCCCACGCGCCAGGATGCGCTGCGGCAGTTGCAG CGCCAGGGGCTCACCCCGCTCAGCCTGGAGGTGAAACGCCGCAACCTGGGCTCGCGACGTCGGCTCAAGGCCGAGGAATTGAACATGGCCATCCACGAGC TGGCCACCATGCTCGCGGCGGGAGTGAGCATGGCCGACGCGGTGGAGGCCCAGGAGCGAGGCGCGCGCCACCCGAAGTTGATTTCCGCCCTGCAGGCGAT GGCCAATGGTCTGCGCCAGGGGCAATCCTTTCCCGTGGTGCTGGAGAGCGCCGGCCTCGACCTGCCGCGCTATGTATATCAACTGGTGGCGGCCGGCGAG ATGACCGGAAACCTCGCAGGAGCCCTGAGGGACTGTGCCACGCAGATGGAATACGAACGGCGAACCCGCGCCGAGTTGCAAGGGGCGCTGATCTACCCTG
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| Amino Acid Sequence |
>probable type II secretion protein
MSSEAVSPGPQMTAEWIPLGQRLLERGLVSGQELERALDLQRRLGGRLGGILVRSGAISENTLMQVLAEQLRLPLVGDDLRKPSEESIAAFLLSTPINTD WFVEEQLVVWEEGEQLLFAARDPLSPSIRETLGYFYPERSIQAVLCRSQDLDGWLEHSLDLARQGADRHAYGSEDIRYLRELAEEAPVVELVNNVMSQAM EKRSSDIHIEPREFDFRIRFRVDGVLHDQLSLPRERFAAVVSRIKLISAIDIAERRLPQDGRMSIRVSGTELDVRVSTLPGVHGESVVMRLLPKEREGLR LDRLGMLPDHLRRMRAWVAEPHGIILVTGPTGSGKSTTLYGALEEINDGVRKLISVEDPVEYQVPNITQVQVHADIGLTFAAALRSILRQDPDVIMIGEI RDLETAEIAVQSSLTGHLVLSTLHTNDAVSAFTRLIDMGVEPFLVASPVRGVQAQRLVRRLCAHCAEPCEPTLAAADLAATEAATARLFPGQAAQWRVAR GCGRCEGTGYSGRVGIYELVDLSSEMRDLIVQRASLEQMHRLAASQGQRNLREDGLIKAWLGMTSLDEVHRVTSG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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