Strain | Pseudomonas aeruginosa BL12 genomic scaffold adgfc-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGATCGCCTGCCGGCCGCCGTCGTACATTGTTTCACCGGCGAGCGCCGGGCGCTGTATGGCTACCTCGACCTCGACCTGCACATCGGCATCACCGGCTG GATCAACGACGAGCGCCGCGGCACCCACCTGCATGATCTGGTAGGCGAGATCCCGGTCGGCCGTCTCATGCTGGAAAGCGACGCGCCCTACCTGCTGCCG CGCAGCCTGCGGCCGAAGCCGAAGAACGGGCGCAACGAGCCGGCCTACCTGGTCGAGGTGCTCGACTGCGTGGCCCGCCATCGCGGCGAGAGCGCGGAGC GCCTGGCCGCTCACACCAGCGCCGCGGCGCGGGAGTTCTTCGGCCTGCCGACGATCGACTGAGATCGCCCTCAAGCTCCCGGCGGATCGGCCGCTAAGCT GACGAACGGTCTCGTTGACCCGCATCAACGATTGCCCCTTACTCAGCTTTCAAGATAATGGCGCCTTGCCATTAGCTTGCCGATAAGAAGAAATCCCCCT
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DNA Sequence for Gene |
>Q066_01372
ATGGGCACCTGGATCAGCGACATTCCACTGAAATACAAGTTCTGGGCCGTCAACGCGGTGGCCTTCTTCACCACCCTGCTGCTGGTGTTGTTCGCCATGC AGCAGGAAGCCGCCGGGCGCAACGCTTCCGCCCAGCGCGCCGCCGCCGCCGAGGGCGAGCTGGTTCAGAGCTGGCCAGCCGGCAGCGCCCTGCCCGCCCG CAGCAACCTGCTGCCGCTGGAACAGGCCGCGAGCCTGGGCGGCACCGCTGCCCAGGCGCTGGGCAAGGGGCAGGGTTGGATCGAGTTGTCCGGCGCGCGC CAGGGCGATACCCCGCTGCTCGGCGCCTGGGTCGGCCAGACCGGCTCCGGCCAGCGCTTCGCCGTGCTCGCCCCGGCCAGCGACCTGTGGCAGGTCTTCG CCGACCGGGCCGGCGCCTACGCCGTCGCCGTGCTGGTGCTGATGCTGGCGCTGCTGGCGGCCTCGCAACTGCTGATCCGCTTCATCCTCACCCACCTGCA TACCCTCAAGGACGTGATGCTGCACGTCGAGAAGAGCGGCGACCTGTCCGCTCGCGTACCGCTGCAGGGACGCGACGAAGTCGGCCAGATGGCCAGTGCC TTCAACGCCATGCAGGCCGGCTACCAGCGCATCGTCGGCACCGTCGCCGCGGCCGCTACCAAGCTCGACGAAGGCGCCCAGGCGCTGGCCCGCAGCATGG GCCAGGTACGCCAGGGCATGCTCGGCCAGCAGAGCGAGACCGACCAGACCGCCACCGCGATCAACGAGATGTCCACCACGGTCTTCCATATCGCCCAGCA CGCCGCCGACACCCGTGACCAGTCGCAGGAAGCCGACCGCCTGGCCGGCGCCGGCCAGCAGGCGGTGAGCCGGGTCAGCACGTCGATCGCCGGGTTGTCC CAGGGCGTCCAGGACACCGCCGAGATGATCCAGAAGCTGGCCGAGGACAGCCAGAAGATCAGCGGCGTGGTCAACGTGATCCACGGCATCGCCGAACAGA CCAACCTGCTTGCCCTCAACGCCGCCATCGAGGCCGCGCGGGCCGGGGAAATGGGCCGCGGCTTCGCGGTGGTGGCCGATGAGGTGCGCAACCTCGCCCG TCGCGTGCAGGACTCCACCGACGAGATCACCCAGATGATCCTCGCCCTGCAGTCGGGTACCCGCGACGCCGTGGAGTTCATGCAGGAAAGCTCGCTCAAG GCAGACGGTTGCGTCAGCCAGGCCGGCGACGCCGGCGAGGCGCTGGCGGCGATCGCCAACGCGGTGGCGCAGATGCGTGAAAGCAACACGCAGATCGCCG TCGCCGCGGAACAGCAGAGCCAGGTCGCGGAAGAGATGACCCGTTCGGTGGTGGGCATCCGCGACGTCACCGAACTCACCGTGCAGCAGACCGTCGAGTC GGCGGCCACCAGTCAGCAACTGGTCGACCTGGCGGGCGATCTGACCCGCGCCATCGGCCAGCTACGCCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGCAGGCGCACCTGCCTATCGCCCGGATAGGCAGGAATCATTCGCCGCGCTGCCGCACCCCGCCTAGACTCGACGACATGCAACGACCCGCCCCGCGG GTCGCCGTCACGGAGTACCGAGAACATGGGCAAACGTCATCCCAACCTGCTCGCCTGGCAATGGCGCGGCTATGCCGACAACCACCGCAACCCGACCAAC CTGGTCCTGCACCTGATCGCCGTGCCGCTGTTCATCGTCGCTGCGATCCTGCTGCTCGGCGGCCTGTTCGGCCTGGACCTGCTGCAGGTGGTGCTCGGTG TCATCGGCATCGGCGCCGGCCTGGCGATCCAGGCCAAGGGACACGCGCTGGAGAAACAGGCACCCGAGCCATTCAGCGATCGGCGCGACGCTGTCAGTCG CCTGCTCGTCGAGCAGTTCGTCACCTTCCCCCGCTTCGTCCTCAGCGGCGCCTGGTGGCGGGCTTGGCGCGAACGGCATAAGTGACAGTTCGTCCGGGAT
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Amino Acid Sequence |
>chemotaxis protein
MGTWISDIPLKYKFWAVNAVAFFTTLLLVLFAMQQEAAGRNASAQRAAAAEGELVQSWPAGSALPARSNLLPLEQAASLGGTAAQALGKGQGWIELSGAR QGDTPLLGAWVGQTGSGQRFAVLAPASDLWQVFADRAGAYAVAVLVLMLALLAASQLLIRFILTHLHTLKDVMLHVEKSGDLSARVPLQGRDEVGQMASA FNAMQAGYQRIVGTVAAAATKLDEGAQALARSMGQVRQGMLGQQSETDQTATAINEMSTTVFHIAQHAADTRDQSQEADRLAGAGQQAVSRVSTSIAGLS QGVQDTAEMIQKLAEDSQKISGVVNVIHGIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLARRVQDSTDEITQMILALQSGTRDAVEFMQESSLK ADGCVSQAGDAGEALAAIANAVAQMRESNTQIAVAAEQQSQVAEEMTRSVVGIRDVTELTVQQTVESAATSQQLVDLAGDLTRAIGQLRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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