Strain | Pseudomonas aeruginosa BL12 genomic scaffold adgfc-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTCCCAGGGACTTGATCCGCGAGATCACGGTCAGGCCATCGAGTTTGGGAATGCCGATGTCGAGAATCACCACGTCCGGTTCGTGCTCCCGGACCAAC TGGATGGCATCCACGCCATTGTCCGTCTCGGCGACCACCTGCAGACCATGCTTTTCCAGCAGGACGCGCACGGCGAGACGGATGACGGGGTGGTCGTCGA CGATCAGGACGGTATGCATAAATTCGATTTACCTTGAGGGACCGGGACAGGGTCGGGATTCGATTTCCCGGGCGCTGCCGCCGGTGGTCATCCATGTTGG GCGCTAGGCCGAGATCGCCGTCCAGAATAGCCTGTTAAGGCGGGGCGACTCGGTTTTTCATGTGGAACCATGCTAATCCAACCGAACCTCCAAATCAGTA GGAAAATTCCCACAAAACATGGGGACTTGTCCCATAGGTCTAGTAAGGGAAACACAGCAGTATATCGCCGGTATTTCCTGGAAACCCTGTGTGGACCGTG
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DNA Sequence for Gene |
>Q066_00275
ATGAATGATTTGAATGTTCTGGTGTTGGAGGATGAGCCTTTTCAGCGCCTGGTAGCCGTCACAGCCCTGAAGAAAGTGGTGCCCGGGTCGATCCTCGAGG CGGCGGACGGCAAGGAGGCGGTGGCGATCCTGGAGTCCTGCGGACACGTCGACATCGCCATCTGCGACCTGCAGATGAGCGGCATGGACGGCCTGGCGTT CCTTCGCCACGCAAGCCTGAGCGGCAAGGTCCATTCGGTGATCCTCAGCAGCGAGGTGGATCCCATCCTGCGCCAGGCCACCATTTCGATGATCGAGTGC CTGGGCCTCAATTTTCTCGGCGACCTTGGCAAGCCATTCAGCCTGGAGCGGATCACCGCCCTGTTGACTCGCTACAACGCTCGTCGCCAGGACCTGCCGC GACAGATCGAAGTCGCCGAGCTGCCCTCCGTGGCGGACGTGGTGCGCGGCCTCGACAACGGCGAGTTCGAAGCCTACTACCAGCCCAAGGTGGCCCTGGA TGGCGGCGGCCTGATCGGCGCCGAGGTCCTGGCACGCTGGAACCACCCGCATCTCGGCGTATTGCCGCCGTCGCATTTCCTCTATGTGATGGAAACCTAC AACCTGGTCGACAAGCTGTTCTGGCAACTGTTCAGCCAGGGGCTGGCGACGCGCAGGAAGCTGGCGCAGTTGGGGCAGCCGATCAACCTGGCGTTCAACG TCCATCCTTCGCAACTGGGTTCGCGTGCGCTGGCCGAGAACATCTCGGCGTTGCTGACCGAGTTCCACCTGCCGCGCAGTTCGGTGATGTTCGAGATCAC CGAGACCGGGTTGATCAGCGCTCCTGCCAGCAGCCTGGAGAACCTCGTGCGTCTGCGGATCATGGGCTGCGGCCTGGCGATGGACGATTTCGGCGCCGGC TATTCGTCCCTCGACCGGCTCTGCGAGTTTCCCTTCAGCCAGATCAAGCTGGACAGAACCTTCGTCCAGAAGATGAAGACCCAGCCCAGGAGTTGCGCCG TCATCAGCAGTGTCGTGGCGTTGGCGCAGGCGCTGGGAATTTCCCTGGTGGTGGAAGGGGTGGAGAGCGACGAACAACGGGTACGCCTGATCGAACTCGG TTGCTCCATAGCCCAGGGCTATCTGTTCGCCCGGCCGATGCCGGAACAGCACTTTCTCGACTATTGCTCCGGATCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCGCCGCCCTGGCCTCGGCTGCCTCTAGCCGAACGCCGGGCCTCGCGCCGGACGCGTTTCCTTTCCATACAACTGCCGGCCCTGCCGCACAGACCTTT CATGCGATCAAAACTATTCCTGCTGTTCTTCTGCCTGCTGCTGTCGGGCGGACGCCTGTTCGCCGTCGAAGCGCATCCGTCCCTGACGCTGTTCAGCCAG TTGCGCATCGAGCACGAGGACATGGCGATCGCCGAGGACGACTGGGCCTGGCTGCGCCACAAGGGGCACCTGAGGCTCGGCGCGGCGCTGGACGAGACCT CGCCCTTCAACGTCCGGCTCGACGACGAGAACTACGAAGGCATAACGGCGGACGTCGCCACGCTGGTCGGGCAGTTGCTCGGCATGCGCATCAAGGTCGT GAGCTTCGATACCCATGCGGATGCCGTGGCGGCGCTCGCTGCCGGAAAGATCGACCTGCTTGGCAGCCATTACAGCTCGGCGGGTGATTCCTCCCTGGTG
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Amino Acid Sequence |
>two-component system response regulator
MNDLNVLVLEDEPFQRLVAVTALKKVVPGSILEAADGKEAVAILESCGHVDIAICDLQMSGMDGLAFLRHASLSGKVHSVILSSEVDPILRQATISMIEC LGLNFLGDLGKPFSLERITALLTRYNARRQDLPRQIEVAELPSVADVVRGLDNGEFEAYYQPKVALDGGGLIGAEVLARWNHPHLGVLPPSHFLYVMETY NLVDKLFWQLFSQGLATRRKLAQLGQPINLAFNVHPSQLGSRALAENISALLTEFHLPRSSVMFEITETGLISAPASSLENLVRLRIMGCGLAMDDFGAG YSSLDRLCEFPFSQIKLDRTFVQKMKTQPRSCAVISSVVALAQALGISLVVEGVESDEQRVRLIELGCSIAQGYLFARPMPEQHFLDYCSGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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