Strain | Pseudomonas aeruginosa BL13 genomic scaffold adgfQ-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGCTGCTCTACGGCGAAATGGCCAAGGCCAAGAAGCCGGACGACTGGGTCGTCGGCGGCACCCCGCAGTCCTTCGAGATCTACGGCTGCATGGTGCGC AAGGGCGACGCGGCGTTCAAGAAAGTGGTCGACAAGGCCATCACCGATACCTACGCCTCCGGCGAGGTCAACAAGATCTACGACAAGTGGTTCACCCAGC CGATCCCGCCGAAGGGCCTGAACCTCAACTTCCCCATGAGCGAAGAGCTGAAGAAGCTGATCGCCAGCCCGACCGACAAGGCCGCCGAGCAGATGTAACG AGCGCCAGGCGTTCCTCCCGGAGCGCCAGCGCTTCGCGCGTCGCCCCCGCCTCGCGGCGGGGCCTCGGGGACGCGGGAGGGGCCTGCCCCTCCCCAGCCG TCTCCCCCGGAAGAGCAGCGCCGCCGGCCCGTACGGCCGCGCCGGCGCCTGCCTTCCCCGCCAGTGTCTGCAACCGATTGAACCGAGGGGAAACCCCAAC
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DNA Sequence for Gene |
>Q067_04236
ATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGGATCGGCAGCGAAACCTACCTCGACTGGTACATCGCCGGTCTGGGCTGGACCATCG CCATCGCCCTGGTCGGCTGGATCATCGCCCTGGCGCTGGGCTCGCTGCTCGGCGTCATGCGCACCGTGCCGAACCGCCTGGTATCGGGGATCGCCACCGC CTACGTGGAAGTCTTCCGCAACGTGCCGCTGCTGGTGCAACTGTTCATCTGGTACTTCCTGGTACCCGACCTGCTGCCCGAGGTCCTGCAGACCTGGTTC AAGCAGGACCTCAACCCGACTACCTCGGCCTACCTCAGCGTGGTCGTCTGCCTCGGCCTGTTCACCGCCGCGCGGGTCTGCGAGCAGGTGCGCACCGGCA TCCAGGCGCTGCCCTACGGGCAGACCTCGGCGGCCCGCGCGATGGGCTTCCGCCTGCCGCAGATCTACCGCCACGTGCTGCTGCCGCAGGCCTTCCGGAT CATCATCCCGCCGCTGACCTCGGAGTTCCTCAACATCTTCAAGAACTCCTCGGTGGCGTCGCTGATCGGCCTGATGGAGCTGCTGGCGCAGACCAAGCAG ACCGCCGAGTTCTCCGCCAACCTGTTCGAGGCCTTCACCCTGGCCACGCTGATCTACTTCACGCTGAACATGAGCCTGATGCTGATCATGCGCCTGGTGG AGAGAAAGGTCGCCGTACCGGGCCTGATCTCCGTAGGAGGTAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGACTTCAGTGGAATCGTTCCCGCCCTGCCGAGCCTCTGGGAAGGCATGCTGATGACCCTCAAGCTGATGGTCCTCGGCGTCCTCGGCGGCGTCGCGCT GGGTACCGTGCTGGCGCTGATGCGGCTGTCGCACAGCAAGTTGCTGTCGAACATCGCCGGCTTCTACGTCAACTACTTCCGCTCGATCCCGCTGCTGCTG GTGATCACCTGGTTCTACTTCGCGGTGCCCTTCATCCTGCGCTGGATCACTGGCGAGGACACCCCGGTGGGGGCGTTCACCTCCTGCCTGGTGGCCTTCA TGATGTTCGAGGCGGCCTACTACTGCGAGATCGTCCGCGCCGGCATCCAGGCCATCCCGAAAGGCCAGATGGGCGCCGCCCAGGCACTGGGCATGACCTA CGGGCAGACCATGCGCCTGGTGATCCTGCCGCAGGCGTTCCGCAAGATGACCCCGCTGCTGCTGCAACAGAGCATCATCCTGTTCCAGGACACCTCGCTG
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Amino Acid Sequence |
>ABC transporter permease
MNYNWDWGVFFKSTGIGSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATAYVEVFRNVPLLVQLFIWYFLVPDLLPEVLQTWF KQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQ TAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAVPGLISVGGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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