Pseudomonas aeruginosa PAO1, PA2620 (clpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AACACCCTTTTGCAGTTAGTCAAGGCGCTGAACCATACGCCTGAGAAACGGATCAACATCATGTCGGTCCATAACTTTCCAGAAAGGCAAAGCTTTTTTT CCTCATGCATGCACCTAGCCAGATTCGACTAACATTCAATCAGGACCATCCCGAGCCTCATGAGCACGAGGACGAAGGGGCGGGGCTCGCGGTACAGGAG TCGAAGCCTGTATTACAGCCGCCACCGTTGTATAAGGTGGTACTGTTCAACGACGATTACACGCCGATGGACTTTGTTGTTGAAGTGCTGGAAGTGTTCT TCAACATGGACCGGGAAAAAGCCACCAAGATCATGTTGACGGTACATACTCAGGGTAAGGCGGTCTGCGGCTTGTTTACCCGGGACGTGGCCGAAACCAA GGCGATGCAGGTCAATCAGTATGCACGGGAGAGCCAGCATCCATTGCTCTGCGAGATAGAGAAAGACAGTTGATCGGATGTTTGGGAGCGAGGTGAAGCC
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| DNA Sequence for Gene |
>PA2620
|clpA
ATGTTGAATCGAGAGCTCGAAGTCACCCTCAATCTCGCCTTCAAGGAGGCGAGGGCCAAACGCCATGAATTCATGACGGTTGAGCACCTGCTGCTGGCCT TGCTGGACAATGAGGCGGCGGCAACGGTATTGCGTGCGTGCGGTGCCAACCTGGACAAGCTGCGGCGCGACCTGCAGGAATTCATCGATTCCACCACGCC GCTGATCCCGCAGCACGACGACGAGCGCGAAACCCAGCCGACGCTGGGCTTCCAGCGCGTCCTGCAGCGTGCGGTGTTCCACGTGCAGAGTTCCGGCAAG CGCGAAGTGACCGGGGCCAATGTCCTGGTGGCGATCTTCAGCGAACAGGAAAGCCAGGCGGTGTTCCTGCTCAAGCAGCAGAGCATCGCGCGTATCGATG TGGTGAACTACATCGCCCATGGTATCTCCAAGGTGCCCGGGCATGCCGAACATCCGCAGGATGGGGAGCAGGATATGCAGGATGAGGAAGGTGGCGAGTC GGCCACGTCCAACCATCCGCTGGACGCCTATGCCAGCAACCTCAACGAACTGGCTCGCCAGGGGCGGATCGACCCGCTGGTGGGGCGTGAGCATGAAGTC GAGCGGGTGGCGCAGATCCTTGCCCGCCGGCGCAAGAACAACCCGCTGCTGGTAGGCGAGGCGGGGGTCGGCAAGACGGCCATCGCCGAGGGCCTGGCCA AACGCATCGTCGATGGCCAGGTGCCGGACCTGCTGGCCGACAGCGTGGTCTACTCCCTCGACCTGGGTGCCTTGCTCGCGGGTACCAAGTACCGCGGCGA CTTCGAGAAGCGCTTCAAGGCCTTGCTCAACGAGTTGCGCAAGCGCCCGCACGCGGTGCTGTTCATCGACGAGATCCATACCATCATCGGCGCCGGTGCG GCATCCGGCGGGGTAATGGACGCCTCCAACCTGCTCAAGCCGGTTCTGTCCTCGGGCGAGATCCGCTGCATCGGCTCGACCACCTTCCAGGAGTTCCGCG GCATCTTCGAGAAGGACCGGGCCTTGGCGCGGCGCTTCCAGAAGGTCGACGTGACCGAGCCGTCGGTGGAAGACACCTATGGCATCCTCAAGGGCCTCAA GGGGCGCTTCGAGCAGCATCACCACATCGAGTACAGCGACGAGGCGCTGCGCGCCGCGGCCGAGCTGGCGGCGCGCTACATCAACGACCGGCACATGCCG GACAAGGCCATCGACGTCATCGACGAGGCGGGCGCCTACCAGCGCCTGCAGCCGGAAGAGAAGCGCGTGAAGCGCATCGAGGTGGCGCAGGTCGAGGATA TCGTGGCGAAGATCGCGCGGATCCCGCCGAAACACGTCACCACCTCCGACAAGGAGTTGCTGCGCAACCTCGAACGCGACCTCAAGCTGACCGTGTTCGG CCAGGACGACGCCATCGAGTCGCTGTCCACCGCGATCAAGCTGTCCCGGGCCGGGCTAAAGGCGCCGGACAAGCCGGTCGGCTCGTTCCTCTTCGCCGGT CCCACCGGCGTGGGCAAGACCGAGGTGGCGCGGCAGTTGGCGAAGGCCTTGGGCGTGGAGCTGGTGCGCTTCGACATGTCCGAGTACATGGAGCGGCATA CCGTGTCGCGGCTGATCGGTGCGCCTCCGGGCTACGTCGGCTTCGACCAGGGCGGCCTGCTCACCGAGGCGATCACCAAGACCCCGCACTGCGTGTTGCT GCTCGACGAGATCGAGAAGGCTCACCCGGAGGTCTTCAACCTGCTGCTGCAGGTGATGGACCACGGCACCCTGACCGACAACAACGGGCGCAAGGCGGAC TTCCGCAACATCATCCTGATCATGACCACCAACGCCGGCGCGGAAGTGGCGGCGCGCGCGTCGATCGGCTTCAACCAGCAGGATCACACCACCGATGCGA TGGAAGTGATCAAGAAGAGCTTCACCCCGGAGTTCCGCAACCGCCTGGATACCATCATCCAGTTCGGCCGCCTGAGCACCGAGACGATCAAGAGCGTGGT CGACAAGTTCCTCACCGAGCTGCAGGCGCAGCTGGAGGACAAGCGCGTCCAGCTCGAGGTCAGCGATGCGGCGCGCGGCTGGCTGGCGGAGAAGGGCTAC GACGTGCAGATGGGGGCGCGACCGATGGCGCGGCTTATCCAGGACAAGATCAAGCGGCCGTTGGCCGAGGAGATCCTGTTCGGCGAGCTGGCCGAGCATG GCGGCCTGGTGCATGTCGACCTGAAGGGCGACGAGCTGGCCTTCGAGTTCGAGATCACGGCGGCGGAGCCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGAGCGCGGCAACGAAAACGCCCGGCAGATGCCGGGCGTTTTCTTTTGCAATCGGCGAGCCGCAGCGGCTCGTGTCGACTCAGCGGGCGCGGTAGGTG ATGCGGCCCTTGCTCAGGTCGTAGGGCGTCAGTTCCACGCGGACCTTGTCGCCGGTGAGGATGCGGATGTAGTTCTTGCGCATTTTGCCGGAGATGTGCG CGGTGACGACGTGCCCATTTTCCAACTCCACACGGAACATGGTGTTGGGCAGGGTGTCGACGACAGTACCTTCCATTTCGAAGCTGTCTTCTTTCGACAT GCAGTAGAGCCCTCGGTATCTATGGGTGGCCCTTTCAATGAGAGGTGGGCCGTGAAAAGCGGCGTGCATTGTGCCAGAAAATCGACAATAGCGCCACACG GCTATCAGGTGAGGGCGACCCAGCGCTGGTTGACGAACAGTTCGATGGGCCGGTACTGGGTCTTGTAGTTCATCTTGCGGCAATTCTTGATCCAGTAGCC
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| Amino Acid Sequence |
>ATP-binding protease component ClpA
MLNRELEVTLNLAFKEARAKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLRRDLQEFIDSTTPLIPQHDDERETQPTLGFQRVLQRAVFHVQSSGK REVTGANVLVAIFSEQESQAVFLLKQQSIARIDVVNYIAHGISKVPGHAEHPQDGEQDMQDEEGGESATSNHPLDAYASNLNELARQGRIDPLVGREHEV ERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDGQVPDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALLNELRKRPHAVLFIDEIHTIIGAGA ASGGVMDASNLLKPVLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVTEPSVEDTYGILKGLKGRFEQHHHIEYSDEALRAAAELAARYINDRHMP DKAIDVIDEAGAYQRLQPEEKRVKRIEVAQVEDIVAKIARIPPKHVTTSDKELLRNLERDLKLTVFGQDDAIESLSTAIKLSRAGLKAPDKPVGSFLFAG PTGVGKTEVARQLAKALGVELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTEAITKTPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKAD FRNIILIMTTNAGAEVAARASIGFNQQDHTTDAMEVIKKSFTPEFRNRLDTIIQFGRLSTETIKSVVDKFLTELQAQLEDKRVQLEVSDAARGWLAEKGY DVQMGARPMARLIQDKIKRPLAEEILFGELAEHGGLVHVDLKGDELAFEFEITAAEPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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