Strain | Pseudomonas aeruginosa BL13 genomic scaffold adgfQ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCACGGCGCCGGTAGCGGCATCCAGCTCCAGGTCCCACTTCACGCCCTGCGGGTCGCGCAACTCGACCTGGTAGATGTAGCGGCCGTATTCCTCTTCCAG CTCGGTATCGTGGACGCTCGAGCCGGGATGCTTGGCGATGGCGTTCTTGTTCAGCTCTTCGAAGGACTTGATGGTCCCGGCGTCACGCAGCTTCAGCGCC TCGTCCGGGCCGAGGTCGCGGGCCTGGGCCAGGCCGGCAGTCAGGGCGATGGCGGTGGCGGCGAACAGGGCAGTCAGTTTCTTCATGGGAATCTCTCCGT GGGAATCAATCGTGTTGCTTTCGACGGTTTGCAGATTAACCGGGCGCTCTTAATTGAAGCTGAATTTGCCGCAAGGACATGGCCGGGGCGCGCCATAGGG TAACGGAAAGCCTCTGCGATGGGGCTCGCCGGCGTTCGAAAGCACTTGGTCCTGCGACAACTCGTCCTATAATCGCCGGTCCGCAAGGGAGAAGACCAGC
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DNA Sequence for Gene |
>Q067_02663
ATGCCAGCCATCCAGATCAAGTCCCCCGCACTGACCCTCAAGGCCGGTCGCCGCGCCCTCGCCCGCATCCGCGAGCGCGGACTGCAGCCGACCGACGTCG GCATCGTCCCCGGTGCCGCCGGCGGGCCAAAGGCGCTGGGCATCCAGGGACTGGACCTGGCGATCTTCGGCGAGTGGCTGCCGCGCGCCCCGCGCGAACG CTCGCTGATCGGCGCCTCCATCGGTTCCTGGCGCTTCGCCAGCGCCTGCCTGCCCGACGCCGTGGCCGGCCTCACCCGCCTCGGCGAGCTGTACACCCGG CAGCGTTTTCCCAAGGGCGTGAGCATCGCCGAAGTCTCGCGCAAGTGCGCGGCGATGCTCGACGACCTGCTCGCCGGCCAGGACGCGCGGATCCTCGACA ACCCGCTGTACCGCCTCAACGTAGTGGTGGTGAAGAGCCACGGGCGCCTCGCCCACGACCACAAGGCCAGCCTCGGCCTGGGGCTGTCCTCGGTGATCCG CGACAACCTGATCGGCCGCCGCCATCTGCACCGCCACTTCGAACGGGTGATCCTGCATGACGCCCGCCAGGCGCCGCCGCTGGCCGCGCTGACCGACTTC CCGTCGCGCTACCTGCACCTGGACGGCGGCAACCTGCGCCAGGCGCTGCTCGCCTCCGGCTCGATCCCGATGGTCATGGAAGGCGTCCGCGACCTGCCTG GCGCCGGCCCCGGCACCTACCGCGACGGCGGCCTGCTCGACTACCATCTCGACCTGCCCTACGAGGACCGCGGCGTGGTGCTCTACCCGCACTTCACCGA CAAGGTGATCCCCGGCTGGTTCGACAAGGGCTTGCCCTGGCGCCGTGGCGACGCCGGGCGCCTGCAGGACGTGCTGCTGCTGGCGCCGTCGCGCGAGTAC CTGGCGCGCCTGCCGCACGCCAAGCTGCCGGACCGCAAGGACTTCACCCGCTACCTCGGCGACGACGACGGCCGCGAGCGCTACTGGCGCCAGGCGATGG CGGAAAGCCGCAGGCTCGGCGACGAATTCCTCGAACTGGTCGACGGCGGCCGGCTCGGCGAACGCCTGCAAGCGCTGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCCACCGACGAGAAGGATCCTGCATGAAACTGGCCGTAGCGCTGATCCACGGCATCGGCGACCAGCCCGATAGCCGCGACGAGGACGGTCTGCACAG CTACGCCCGCGAACTGGTAGCGGCGCTGCGCCGACGTCTCGGCGCGGAAGCCGGCGAGGTGGCCTTCCAGAGCCTGTACTGGGCCAGCGTGCTGGACGCC CGCGAGCTGGACTACCTCAAGCGCATCGAGCGCGAGCCGCTGGGCTGGCGCTGGCTGCGCCGGGCGGTGACGCTGTTCCTCGGCGACGCCAGCGGCTACC GAAAGGTCAGCGCCGCCTACGACACCACCTACCAGCAGGTCCACCAGCACGTGCGCAGCGGGATCATGGCCCTGCGCGCGAAGGTCGGGCCGCAGACGCC GCTGGTGATCCTCGCCCACTCCCTGGGCGGGCACATCGTATCCAACTTCATCTGGGACCAGCAGAAACTCAACCGCACGCCGAGTTGCTCGATCGACCCC
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Amino Acid Sequence |
>hypothetical protein
MPAIQIKSPALTLKAGRRALARIRERGLQPTDVGIVPGAAGGPKALGIQGLDLAIFGEWLPRAPRERSLIGASIGSWRFASACLPDAVAGLTRLGELYTR QRFPKGVSIAEVSRKCAAMLDDLLAGQDARILDNPLYRLNVVVVKSHGRLAHDHKASLGLGLSSVIRDNLIGRRHLHRHFERVILHDARQAPPLAALTDF PSRYLHLDGGNLRQALLASGSIPMVMEGVRDLPGAGPGTYRDGGLLDYHLDLPYEDRGVVLYPHFTDKVIPGWFDKGLPWRRGDAGRLQDVLLLAPSREY LARLPHAKLPDRKDFTRYLGDDDGRERYWRQAMAESRRLGDEFLELVDGGRLGERLQALD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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