Pseudomonas aeruginosa BL13, Q067_01904
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL13 genomic scaffold adgfQ-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTATCGGACCGTTGAACGTTACCTGCATCCAGGCGCCGGTATTCTTCGGCGACAGCCTCAGCGTGACCCTGCAGTGCGCGGAACCGGTGGACCTGGCTGC GGTGACGCGGGTCCTCGAGGCGACGAAAGGTATCGAATGGGTCGGCGAGGGCGATTATCCGACGGTGGTCGGCGATGCCCTCGGCCAGGACGAGACCTAT GTCGGCCGGGTGAGGGCGGGGCAGGCTGATCCCTGTCAGGTCAATTTGTGGATTGTGTCTGATAATGTGCGAAAAGGTGCCGCGCTGAATGCCGTGCTCC TGGGTGAGTTGTTGATAAAACACTATCTGTAAAAGATACTTACCCACAGATTTGTAGAATTATTCGAGCTTGTTAATACTGGTTCGATCCGCTGCTGCCG GGGAGCGTCCGTCCATGCATGGCTGGGCGAGCGGACAGCAAGCACCGACGCACTCCCTCTCGTGAAACGAGAAAAGATATTAAAACCAAGGGATTACACT
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| DNA Sequence for Gene |
>Q067_01904
ATGGTTCGGCTTCGTACACTGGTTCGGGCAATCGCGGCGGCCTCGGTCCTGACTTCCGGCATGGCGCATGGATTGGGACTGGGGGAAATCACCCTGAAGT CGGCGTTGAACCAACCGTTGGATGCCGAGATCGAGCTGCTCGAAGTTCGTGACCTGGGTTCGGGCGAGGTGATCCCGAGCCTGGCGTCGCCGGAAGAGTT CAGCAAGGCGGGCGTCGATCGCCTGTACTACCTCACCGACCTGAAGTTCACGCCGGTGGTGAAGCCCAACGGCAAGAGCGTCATTCGCGTGACCTCGTCG AAGCCGGTGCAGGAGCCCTACCTGAACTTCCTGGTCCAGGTGCTCTGGCCGAACGGCCGCCTGCTGCGCGAGTACACCGTCCTGCTGGATCCGCCGCTGT ACTCCCCGCAGGCCGCGGCAAGCGCTCCGCAAGCGCCGGTCAGCGCGCCGCGCGCGACCGGCGCCCCGCGAGCCCCGCAGGCGCCGGCTCCGGTGCGTAC CACCGCGCCGGCAGGTAGCGACACCTATCGCACCGTTTCCAACGACACGCTCTGGGAGATCGCCCAGCGCAACCGTACCGATCGCGTTTCCGTACCCCAG GCGATGCTTGCGTTCCAGGAACTGAATCCGGGCGCCTTCGTCGATGGCAACATCAACCGGCTGAAGAGCGGCCAGGTCCTGCGCATTCCCACCGAACAGC AGATGCTGGAGCGCTCGCCGCGCGAGGCGCTGTCCCAGGTGCAGGCGCAGAACCAGAGCTGGCGCGGCAGCCGCAATCCGGCCGCGGGCAGCGCTGGCGC CAGGCAGTTGGATGCGACCCAGCGCAATGCCGCCGGGTCGGCGCCATCCAAGGTCGACGCCACGGACAACCTGCGCCTGGTGTCTGGCGAGGGCAAGGCC AGCAAGGGGGCCGACAAGGGCGGGAAGGGCGACAGCAAGGCGATCGCCGATACCCTGGCGGTGACCAAGGAAAGCCTCGACAGCACTCGCCGCGAGAACG AGGAATTGCAGAGCCGCATGCAGGATCTGCAGAGCCAACTGGACAAGCTGCAGAAGTTGATCCAGTTGAAGGACGCCCAGTTGGCCAAGCTGCAAGGGCA GTTGGGCGCAGAAGGCCAGGGCGCAGCCCAGCCGAACGCAGCCCTGCCGGATGCGTCCCAGCCCAATGCAGCCGCGCAGGCGCCGGCTCAGCCCGGGACT CCCGCTGCGGCAGCGCCGACTCCTGCTCCGGCCGGAGAAGCACCCGCCGCTCCGGCGCAGCCTCCGGTGGCGCCGCCGCCCGCGCCAGCTGCCGAGAAGC CTCCGGCACCTGCCGTTCCGGCGCCCGCTCCGGTACAGGCGGCAGAACAGCCGGCACCGAGCTTCCTCGACGAACTGCTGGCCAACCCGCTGTGGTTGGC GGTGATCGGCGGTAGCGCACTGCTGGCGTTGCTGGTGCTGCTGATGATCCTGTCGCGGCGCAATGCGCAGAAAGAGAAGGAAGAAGCCCAGGCTTTCGCC GCGGATGCCGGCGAGGAACAGGAGGATGCGCTGGACCTGGGAAAGGACGGCTTCGACGACCTGACCCTCGACGAGCCTGAACCGCAGGTCGCAGCCGCTG CGCCGCAGGTCGAGAAGACCACTGCGCAGACTTCCGATGCGCTGGGCGAGGCCGACATCTATATCGCCTACGGGCGTTTCAACCAGGCCGCCGAACTGTT GCAGAACGCCATCTACGACGAGCCGCAGCGCACCGACCTGCGCCTCAAGCTGATGGAAGTCTATGCCGAGATGGGCGATCGCGAAGGTTTCGCTCGCCAG GAAAACGAGCTGCGCGAAATCGGCGGCGCACAGCCGCAGGTCGAGCAGCTCAAGTCGCGCTATCCGGCAATGGTCGCGGTCGCCGCGGTTGCCGGCCTGG CCGGCGCCAAGCTGGCGCAGGACGAGCTGGATAGTTTCAGCCTCGACGACCTGTCGCTCGACGACAGCGGTCACGCGGCCAAGCCGGATGCGGCAGGACA GGATCTCGACGACGCCTTCGACCTGAGCCTGGACGACCTGGGCGGCGGCGATCTTGGCAGCGACGACGTGCAGGCCGACCTCAAGTCCGACAGCGGGGCG CTGGACGACCTGACCCTGGACAGCGATCTGGACCTGGCGGCCTCGACCGCGGCGGACAAGCCTGTCGACGATCTCGACTTCGGCCTGGATTTCGCGGAGT TGGCAGAGACTCCGAGCCAACCCAAGCATGACGACCTGGGCGATTTCTCCCTGGATCTCGATGCGCCGGAAGACAAGCTTTCGGACGACGACTTCCTGCT TTCGCTGAACGACGAGGTGCCCGCCGCGGCGCCAGCCGACAACGAATTCACCCTCGATACCGAGGCTGCCGAAGAGCCGGCGTTGTCCCTGCCGGACGAC TTCGACCTGTCGCTGGCCGACGAGCCGACGGAGCCGGCCGCTCCGGAGAAGGGCGAGGACAGTTTCGCCGCCCAGTTGGACGAGGTGAGTGCGCAGTTGG ACGAGTTGGCCAGCAACCTTGACGAGCCGAAGAGCGCGGCGCCGAGTTTCTCCGCCGAGGATGCAGCGGTCGCCTCCGCCCTGGACGGAGACGCCGACGA TGACTTCGACTTCCTCTCCGGTGCCGACGAAGCGGCGACCAAGCTGGATCTGGCTCGCGCCTATATCGACATGGGCGATAGCGAAGGCGCGCGCGATATC CTCGACGAAGTCCTGGCCGAAGGTAACGACAGCCAGCAGGCGGAAGCCCGCGAGTTGCTGGAGCGCCTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGGAAATGAAGCGACCCTCATGAACGATGTTGTTCCGCCAGCGGCAGCCGAATCGGCTGCCGCTGGCGTTTCCAGAATCGCCCTCGGCATCGAGTACA AGGGCTCCCGCTATCGTGGCTGGCAGCGCCAGGAAGCCGGCGTGCCTTCCGTGCAGGAAGCGCTGGAGCGCGCCTTGTCGAAGGTTGCCGCCGAGCCGGT CGGGGTGATCTGCGCCGGCCGTACCGACGCTGCCGTTCATGCCAGCGGCCAGGTGGTGCATTTCGACACCGTGGTGGAGCGCCCGTTGAAAGCATGGGTG ATGGGCACCAACGCCAACCTGCCCGCGGATATCAGTGTGACCTGGGCGAGAGTGATGCCGGCGCATTTCCACGCGCGCTTCTCGGCCATGGCCCGGCGCT ATCGCTACGCCATCTACAACGATCCGATCCGCCCGGCGCACCTGGCCGAGGAGGTCACCTGGAACCATCGGCCGCTGGATATCGGGCGGATGCGCGAGGC
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| Amino Acid Sequence |
>FimV domain-containing protein
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLGSGEVIPSLASPEEFSKAGVDRLYYLTDLKFTPVVKPNGKSVIRVTSS KPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRATGAPRAPQAPAPVRTTAPAGSDTYRTVSNDTLWEIAQRNRTDRVSVPQ AMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLERSPREALSQVQAQNQSWRGSRNPAAGSAGARQLDATQRNAAGSAPSKVDATDNLRLVSGEGKA SKGADKGGKGDSKAIADTLAVTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLGAEGQGAAQPNAALPDASQPNAAAQAPAQPGT PAAAAPTPAPAGEAPAAPAQPPVAPPPAPAAEKPPAPAVPAPAPVQAAEQPAPSFLDELLANPLWLAVIGGSALLALLVLLMILSRRNAQKEKEEAQAFA ADAGEEQEDALDLGKDGFDDLTLDEPEPQVAAAAPQVEKTTAQTSDALGEADIYIAYGRFNQAAELLQNAIYDEPQRTDLRLKLMEVYAEMGDREGFARQ ENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKLAQDELDSFSLDDLSLDDSGHAAKPDAAGQDLDDAFDLSLDDLGGGDLGSDDVQADLKSDSGA LDDLTLDSDLDLAASTAADKPVDDLDFGLDFAELAETPSQPKHDDLGDFSLDLDAPEDKLSDDDFLLSLNDEVPAAAPADNEFTLDTEAAEEPALSLPDD FDLSLADEPTEPAAPEKGEDSFAAQLDEVSAQLDELASNLDEPKSAAPSFSAEDAAVASALDGDADDDFDFLSGADEAATKLDLARAYIDMGDSEGARDI LDEVLAEGNDSQQAEARELLERLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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