Strain | Pseudomonas aeruginosa BL14 genomic scaffold adggl-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
|
|
DNA Sequence for Gene |
>Q068_05862
ATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGCCTGAACAACTACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGC TCAACGAGCGCGGGTTGCTGTTCAGTGGCGCCGACATGACCCTGCGCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGA TATCGCCCGCGACGATGCCGGCAACCGTGCCGCCAGCCTGCGCAACCTTTCCGGGGTGATCGAGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATC GAGAACCGTCGCGCCGTGCTGGAAAGCAAGTCGGGCCTGTACACCGCGAAGATGGAGCAGACCGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCG GCAAGCGCAACGCCATCTGGACCATCACCCAGCGCGACAAGACCGAGGTCACCGCCAGCAGCGCCATGGGGCAACTGCTGGCCGGAGGCGACTTCGCCAT CGACGGCGGCACCCTGAACAACCTTTCCAGCCTGATCGGCAGCGGCGGCAACCTCACCGCCAACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGC GAGCTGGAAACCATCCGCGTGCTGCGTACCGCTCGCGGCGGCGATATCGGCGGCATCGACCAGAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGA GCGCCAATTTCGACCCGGCGCGCGCGGGCGAGATCCCCGCCGCGCTCAACGCGATCCTCAGCGACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCC GACCCCGATCAGCAGTGGCGACCAGTCCTACGCAGCGGTGATCCAGGCCGCCGGCGACGTCACGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACC CGCCCCGGCTACACCTTCGTCGGCAGCGGCCGCCAGGTGGGCGACAGCGCGGTGGGCGGCAGCGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGC CGCCCGACCTGGCGCGGCGCCAGGTCAACCCGGTTACCCTGCCCGGCTTCAGCCTGCCCCAGGGCGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTCGC CGAGGACGGCAATGGCAGCGCCGCGCTCGGTGCCGGCGCCGACCGCACCCAGGGCGGTAGCGGCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGTCGCC GGTACCTGGCAGGGCCAGGGCGTGCGAGTCGATGGCCTGGCTGGCGCGGCCAACGTCCAGGGTCAGGGCGGCAGCGCGCTCGGCGGTAGCCTGCCGGGCG TCGCCCGGGTCCAGGGCGTGCCCGGCAACGCCACGCCGAGCGCCAGCCACAAGTACCTGATCGAGACCAACCCGGCGCTCACCGAACTGAAGCAGTTCCT CAACTCGGACTACTTGCTCAGCGGCCTGGGCATGAACCCGGACGATAGCAAGAAGCGCCTCGGTGACGGTCTCTACGAGCAGCGGCTGATCCGCGACGCG GTGGTGGCGCGCACCGGCCAGCGCTACATCGACGGGCTGAGCAGCGACGAGGCTCTGTTCCGCTACCTGATGGACAACGCCATCGCTTACAAGGACAAGC TCCAGCTGCAACTGGGCGTAGGTTTGAGCGCGGAGCAGATGGCGGCGCTGACCCACGACATCGTGTGGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGT CCTCGCGCCGGTGGTCTACCTGGCCCAGGCGGAGGGTCGGCTGGCGCCCAGCGGTGCGCTGATCCAGGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGAC CTGCATAACGTCGGCACCCTGCGCGCGCGGAACGACCTCTCGGCGACAGCCGACAACCTCGACAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACC TGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGGGTCATCGCCGGGCGCGACGTGAGCCTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAG CGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCTGGGAGCGCAGCTTCGCCGACAGCGCCGCGCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAG GCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCAGAGCCGCGGCGACCTCAGCCTCGACGCCGGACGCGACGTCACCGTCGCCGCCATCGAGGATC GCCAGGGCCAGACCCGCTGGAACACGTCGCGGCTACAGAGCGTGACCCAGCTCGGCGCCGAAGTCAGCGCCGGGCGGGACCTGAACGTCAGCGCCGGGCG CGACCTCAGCGCAGTGGCCAGCGCCCTCGAAGCGCGCCGCGACATCGCCCTCTCCGCCGGGCGCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCAC AGCTTCGCCACCGGCAAGAAGGTGACGGCGAAGAACGATCGGGTGGAACACCAATCGACCGTGGTCAGCGCCGGCGGCGATCTCAGCGTGCAAGGCGGCA ATGACGTGACCTTCGTTGCCAGTCAGGCGAAGGCCAGCAACGAGGCCTATTTGTACGCCGGCAACGACCTCAATCTGCTGGCGGCTCACGACGAAAGCTA TTCCTACTACGCGAAGAAGAAAAAAGGCTCGTTCGGGCGCAGCAGTAGCCGGATGAGCGAGAGCGAAACCAGTACCGTGGTGTCGTCGTCGATCCAGGCG GGACAAGGGGCGGAACTGGTCGCTAAGCGTGACGTCAACGTCGAGGCCTCTTCCGCCTCCAGCATGAAGGGCGAGCTGACGGTCGTGGCGGGGCGCGACG TGAACCTCACGGCAGCTGCGAACAGCTACTCCAGCGCGTCCGCGAAATCCAAGTCCGGAGGCCTGGGGCTGTCATCCACCAGCAAGGCCAACGCCCAGTC CTCTTCCTACACCAGCGTTCAGGGCGCCACGTTGAGTGGCGATACCACCGTGGTGCAGGCGAGAAGGGACATCTCGGTGGCCGCCAGCAATGTGGTTTCT ACCGGGAAGACTGCGCTGCGTGCCGGCAACGACATCATCATCGACAGCGTGGCGGAGACGTCGGAGTCGCATCGCAGCGAGTCGAAGAAGAAGTCCGGCC TGATGAGTTCCGGAGGGATCGGCATCACGCTCGGCACGGCGAAGAATGCCTCGACGCAGGACACCCGTACCGTCGTCAACCAGGGCAGCACCATCGGCAG TGTGCTCGGCGATGTCGACATGCGGGCGGGCAAGAACCTGTCTATCACGGCTTCGGATGTGGTGGCCGGCAAGGACATCAACCTCGTCGGGCAGAACGTG AGCATTCTCGCTGCCGACAACCAGAACGTCAGCGAGCAGACCCGCAAGACCAGCAAGAGCGGCTTGACGCTGGCCTTGTCGGGAACGGTCGGTAGCGCAA TCGACGCCACCTACCAGAATGCCAAGCAGGCCAGGAACGAAGACGACAGTCGCCTTTCCGCGTTGCAGGGGATCAAGGCCGGCTTGAGCGGCGTCCAGGC CTGGCAGGCAGCTCAGCAGAACGGCGGCATGACGGGCGAGAACAGCGCGCAGTTCGTCGGCATCAGCGCTTCGCTGGGCTCGCAGAAGTCCAGCTCTCGG CAGCGCCAGGAGCAGCAGATCAGCCAGGGAAGCACGCTCACCGCCGGTGGCAACCTGAACATTATCGCCACGGGTTCCGGGGCTGTCGGCGAAGACGGCG ACTTGCGCGTGCAAGGCAGCAAGCTGCAGGCTGGCAAGGACCTCCAACTGATCGCCAACCGCGACGTCGTGCTGGAAGCCGCGGCCAATACGCAGAAGCT CGATGGCAAGAACAAGAGCAGCGGCGGCGCTGTCGGGGTAAGCGTCGGCGTTGGTTCGGGCGAGGCTGGCATCAGCATTTTCGCCAACGCCAACAAGGGC GCCGGCAAGGAAATCGGCAACGGCACCACCTGGACCGAAACCACCCTGGACGCGGGCCAGAAGGCCAGCTTGGTCAGCGGGCGCGACACCACGCTGAAAG GGGCGCAGGTCAATGGTGAAAGCATCCTGGCGAAAGTGGGTCGTGACCTTACCCTGCAAAGCCTGCAGGATCGCGATTACTACGATTCCAAGCAGAAGAA CGTCGGTGGTGGGGCGAGTTTGGCTATCGTTGGCCAGGGTGGCGGCGCCAACTTGAGTCTCAGCCAGAGCAAGCTGCATTCGAAGTACGACAGCGTGCAG GAGCAGACCGGGCTGTTCGCCGGCAAGGGCGGCTTCCAGGTGGAGGTGGGCAAGCACACGCAGCTGGATGGCAGCGTGATCGCCAGCACCGCCGAAGCCG AGAAGAATCGCCTGAGCACAGGCTCCCTGGGCTGGAGCGAGATCCGTAACAAGGCCGAGTACAAGAGCCAACTTCAGAGTGTCAGTGTCAGCAGCGCCAA CGATGGCGCCGGTGCGTTCGTCAGCAACATGCCTAGCGGCATGCTCATTGCCTACAACCACGGCGATAGTGCCAGCGGTACCACGGGTTCGGCGATATCC GAAGGCACCCTGGAGGTTCGCGATCCGGCGCGCCAGCAACAGGATGTGGCGACGCTCAGCCGTGACCCGAGCCGCGCCAACGATAGCGTCAGTCCGATCT TCGACAAGGAGAAAGAGCAGAAGCGTCTGCAGCAGGTCCAACTGATCGGCGAGATCGGCACCCAGGCCATGGATATCCTGCGGACGCAGGGCCAACTCGA CGCCGACAAGGCGGCGCGGGCCGAACTGGAAGCGCGGGGTATCTCCGCGCCGGACGCCGGCGCCAGCGAGCGGCAAGTCGAGGACTACCGCAAAGCGCTT CTGGGCACGAATGCCTACCAGGACATCATGGGCAAGTACGGCACCGGAGGCGACTACCAGAAGGCCGCCCAGGCGGTGACCGCAGCCTTGCAAGGGCTGG CCGGCGGCGACATTGGCTCGGCGTTGGCGGGAGCTTCCTCGCCCTATGTGGCGGGCGTGATCAAGCAGGTGGCAGGCGACAATGACACGGCGCGGATCAT GGCCCACGCGGTTCTTGGCGCGGTGGTTGCGCAGGCCCAGGGCAATTCGGCTGCTGCGGGGGGCGCAGGAGCGGCGGGGAGCGAACTGGCGGCGCAGGTG ATCAGCGAGCGACTGTACGGAACCCGTGATAGCGCGACGCTGAACGAAGCGCAGAAGCAGACCATCACCGCGCTGGCCAGCCTGGCCGGCGGATTGGCAG GCTCCGTTGTCGATGGGAGCAGCGGAGGAGCCATTGCCGGGGCCGCAGGCGGGAAGAATGCAACGGAAAACAACTTCCTTGGCGGCGGAACTCCGCCGGG CTTGATCAGCTACGGTCAAGCAGCGAGTTCCTTGACCGAGTACATGCGCAAGAACGGCGCGACAGCCGAGGAGATCACCCAGGCGCAACGTGATCTGGCC CAGGGACAGGGCTTCGATGGCGTACAGCCAGCGAATGAGTTCATCAAGGCCTGGGGCGAGGCCATGGTTGCGGAAGCTGCCGGCCTTGGGATTGTTGCGG GGTTGGGTAGATTTGGGTTGTGGGGTGCAAAGGGAGCGACTCCTGTTGTAACTGCTGAGGGGCGAATCGGTAACTCAGTATTTACGGATGTTAACCAGAC GGCTAGACCAGCAGCCCAGGCGAATCCCAACCAACCGACCTTGATTGCCGATCGAGTGGACGCAAAGATAGCGGCTAAGGGGACGCCTCATCCGAATGGG AATATGGCGGATGCTCATGCAGAGATTGGCGTTATTCAGAAGGCATTTAATGAAGGTAAAACGGTAGGCTCCGATATGACCATGAACGTAGTAGGTAAGG ATGTTTGTGGATACTGCAGAGGTGATATTGCTGCGGCAGCTAGCAAGTCTGGTTTGAAATCTTTAACTATTCAAGCCAAGGATGATATTACAGGTTTGCC GAAGACGTATTACTGGGAGGTAGGAATGAAGTCAATTAGAGAGAAAAAAATATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TTGTTCTTGGTGGGTATTTGATTGCTCCTGGGGCTAAAAGAACTCAATTTCCGGTGATGTCTGATCCTGACGAAGAAGAAGTTCTGGAAGCGCTTTCTAA ACTTCGCCACAGTTCGGGGGTGTTGGTTCTAAGAGTTAAGCCGGAACCTGAGATTGGCGCTTATGAAGTGGCGCTTCATGCAGAGAATGGACGATTTATA GTTATGCTTAGCCAGCATGCTGAAGATGGTGAGCATGAGGTTTTCACGTTAAGAGGGGCTGGTGAAGGTAATGGATTTACTTATATTTTAGGCGAGGCAT ATCCTATGGCGGCAGTGACAGAAAATTTTGGGTTGATATGTAATTGTTTCAAAAAATTTTTGCTAGAGAGGAAAGTGTCTTCTGATGTGTGGGTTTAATG TTTCAACGTAAATGAAATAATAAAGGGAATAAAGGGAATAAAGGGAATAAAGGGAATAAAGGGAATGGGTTTATTTCCCCTACTCTAATTTTCTAAGCAG
|
|
Amino Acid Sequence |
>hypothetical protein
MTAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLI ENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETG ELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVT RPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNVA GTWQGQGVRVDGLAGAANVQGQGGSALGGSLPGVARVQGVPGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLGMNPDDSKKRLGDGLYEQRLIRDA VVARTGQRYIDGLSSDEALFRYLMDNAIAYKDKLQLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPSGALIQGRDVKLVSGGD LHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQ AGRDIANLGGVLQSRGDLSLDAGRDVTVAAIEDRQGQTRWNTSRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEH SFATGKKVTAKNDRVEHQSTVVSAGGDLSVQGGNDVTFVASQAKASNEAYLYAGNDLNLLAAHDESYSYYAKKKKGSFGRSSSRMSESETSTVVSSSIQA GQGAELVAKRDVNVEASSASSMKGELTVVAGRDVNLTAAANSYSSASAKSKSGGLGLSSTSKANAQSSSYTSVQGATLSGDTTVVQARRDISVAASNVVS TGKTALRAGNDIIIDSVAETSESHRSESKKKSGLMSSGGIGITLGTAKNASTQDTRTVVNQGSTIGSVLGDVDMRAGKNLSITASDVVAGKDINLVGQNV SILAADNQNVSEQTRKTSKSGLTLALSGTVGSAIDATYQNAKQARNEDDSRLSALQGIKAGLSGVQAWQAAQQNGGMTGENSAQFVGISASLGSQKSSSR QRQEQQISQGSTLTAGGNLNIIATGSGAVGEDGDLRVQGSKLQAGKDLQLIANRDVVLEAAANTQKLDGKNKSSGGAVGVSVGVGSGEAGISIFANANKG AGKEIGNGTTWTETTLDAGQKASLVSGRDTTLKGAQVNGESILAKVGRDLTLQSLQDRDYYDSKQKNVGGGASLAIVGQGGGANLSLSQSKLHSKYDSVQ EQTGLFAGKGGFQVEVGKHTQLDGSVIASTAEAEKNRLSTGSLGWSEIRNKAEYKSQLQSVSVSSANDGAGAFVSNMPSGMLIAYNHGDSASGTTGSAIS EGTLEVRDPARQQQDVATLSRDPSRANDSVSPIFDKEKEQKRLQQVQLIGEIGTQAMDILRTQGQLDADKAARAELEARGISAPDAGASERQVEDYRKAL LGTNAYQDIMGKYGTGGDYQKAAQAVTAALQGLAGGDIGSALAGASSPYVAGVIKQVAGDNDTARIMAHAVLGAVVAQAQGNSAAAGGAGAAGSELAAQV ISERLYGTRDSATLNEAQKQTITALASLAGGLAGSVVDGSSGGAIAGAAGGKNATENNFLGGGTPPGLISYGQAASSLTEYMRKNGATAEEITQAQRDLA QGQGFDGVQPANEFIKAWGEAMVAEAAGLGIVAGLGRFGLWGAKGATPVVTAEGRIGNSVFTDVNQTARPAAQANPNQPTLIADRVDAKIAAKGTPHPNG NMADAHAEIGVIQKAFNEGKTVGSDMTMNVVGKDVCGYCRGDIAAAASKSGLKSLTIQAKDDITGLPKTYYWEVGMKSIREKKI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|