Strain | Pseudomonas aeruginosa BL14 genomic scaffold adggl-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGCGTCGAAGCGGGCCTCCTCCACCTCGCAGTGGAAACGGATCTTCTCGCGCAGACGGTACTTGTCCGCGCAATGCCGCAGGTAGTCGAGGATTTCC GCCTGCGGGGCGAACTTGCGCGACCAGTCGGCCTTCGGCTCGAAGGAAAACGAGTAGAGATGCGAGGGGACGTCGCAGGCGGCGCCCGGGTAGCGGTTTT CCCGCCAGCAACCGCCGACGTCGGCGGCCTTTTCCAGGATCAGGTAATCGTCGATGCCTGCCTGTCGCAGGCGGATCGCCAGGCCGAGACCGGCAAAGCC GGCGCCGACCACCAGCACCCGCAAGGGGGCTTCAAGGCGGGACTCGTTGTGCATTGTTGTGCTCCCGTTTGTTGCTTGCCACGCCGTCCGGCGCGATTCC GCCCAGCGGCAGATGGCAGCATCCTAGTTCGCCGGGGCGACTGGCGTTATGGCCGGGCCGGACATAAAGTTGTGATTTTCGGTCAACCCCGGACGCCGCC
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DNA Sequence for Gene |
>Q068_02493
ATGCCCACTCCGCCCTGGTCTCCCCGCCGCAGCGCCATCAGCGCGCACCTGCTGATCCAGTTCGGCATCGACCGCGGCCTCGGCCTGGAGCAGTGCCTGG CGGGTAGCGGCCTGGATATTCGCCTGCTCGGCGATCCCTCCGGGGAAATCGACGCGGCCCAGGAACTGAGCGTCGTGCGCAACCTGGTCCGGCACCTGGG CGACGCCTGCGCGCCGGGCCTGGCGGCAGGCCTGCGCTATCACCTCAACGCCTATGGCATCTGGGGCTTCGCCCTGCTCAGCAGCCCGACCTTCCTCAGC GCCGCGCAACTGGGCCTGCGCTACCTCGACCTGACCTTCGCCTTCCATGGCATCCGCCTGGAGGTACACGGCGACGAAGCGCACCTGGTGCTCGACGACA CCGGCATTCCCGAGGACCTGCGGATTTTCCTCCTCGAACGCGACGCCGGTGGCGTGCTGCGCATCCAGCGCGACCTCACCGGGCAGCGCCTGCCGATCCT CCGCGCCGGCTTCCGCCGCCCGCCGCCCGCCGACCCCACGCCCTACGTGCGCGAGCTGGGCCTGTGCCCGGCGTTCGGCCAGGCGGATAACCGGGTGGTC TTCGAGCGGCATTTCCTCGACCTCCCGCTGCCCGGCGCCAACCTCGAGGTGGCGCGCGCCTGCGAGGAGCAGTGCCGCGCCCTGCTCGCCCGCCGCCAGG TGCGCGGCGGCCTGGCCGGACGCATCCGCGACCGCTTGCTGAGGACGCCCGGCCACTTGCCGGACATGCAGACCCTAGCCATGGAACTGCACCTCACCGT GCGTACCCTGCGTCGCCGCCTGGACGACGAGGGCAGCAGCTACCGCCTGTTGCTCGACGAGGTGCGCCAGGCCCTCGCCGAAGAGCTGCTGGCCACCGGC GCGATCCGCCTGGAGGAGATCGCCGAGCGCCTCGGCTACGGCGAGGTGTCCAACTTCATCCACGCCTTCAGGCGCTGGAAAGGCATGACGCCGCGCCAGT ATCGCCAGCGGCGACGACTCGGCGCGATGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCTCCGGGCTTATTCCACGAAGGCAGGACGCCAGCGCTCGATGTTCGTTTCGCCGCCGCCTGCCAGCGGCTAGATTGGCCGTTCACGCGCGGCATCC GGCGGCGCGGCAGCGGAGGCATCTCCGCTGGCAACGGGAGAACGACACATGGGTTGCCAGCAACACGCATGGCCGGCGCACGCGCCGGAGCAGGTCGAGG CCGAGGTCAACTATATCCGCGACAACGGCCAACGGCCGGTCGCCTACACCTATCCGGCCCCCGCCGGGACGCCGCAGCGCAGCGCGCTGTTGCAGCCGAC CCGGGTGGCGATCCGCAATGCGCGTCTGCTGGCGCAACCGGCCAGCCTGGAGCGCGAGGGTTTCCAACTGGTGCGCGAGGCGAGCGCGGTGGGCGATTTC GAGGATGAAGCCCAGGTTCGTGAACGCTACTACCCGGAAAGCATCGCCCTGCTCCGCCGCCTGACCGGCGCCGCCGAGGCGGTGATCTTCGACCACACGG
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Amino Acid Sequence |
>AraC family transcriptional regulator
MPTPPWSPRRSAISAHLLIQFGIDRGLGLEQCLAGSGLDIRLLGDPSGEIDAAQELSVVRNLVRHLGDACAPGLAAGLRYHLNAYGIWGFALLSSPTFLS AAQLGLRYLDLTFAFHGIRLEVHGDEAHLVLDDTGIPEDLRIFLLERDAGGVLRIQRDLTGQRLPILRAGFRRPPPADPTPYVRELGLCPAFGQADNRVV FERHFLDLPLPGANLEVARACEEQCRALLARRQVRGGLAGRIRDRLLRTPGHLPDMQTLAMELHLTVRTLRRRLDDEGSSYRLLLDEVRQALAEELLATG AIRLEEIAERLGYGEVSNFIHAFRRWKGMTPRQYRQRRRLGAMP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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