Strain | Pseudomonas aeruginosa BL14 genomic scaffold adggl-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGAAAAGTCGACGGTAATTATTCGTTGAATAACAGGGAAGTGCATACTTCCAACTTGGAAGTTAACTGCATGGCACCATCCATGCATTACACGGATGAC GGTTTTTATTATAAGTCCAAACTGGCGAAGACAAGCAAGAGAAGCCGGGATGCCAGAGTTCCATAGTCGGAAATACAAGCGTTGCAATGTCGACGGATAG CGCGAAGAGGCGGCGGTACCCTGCGAAACGAGGCAATTCCCCGAATGGCGGGCACTCGAACGGATTTATAAGTCCGCCGTTCGGCGTTCACCTCGACGCC TGTGCACGGGATACTTATATCGGTGGTTCGCACCACTGATTATCGATTTGAACTCGTTCGAGTCTTTACCGCGTTCCCGGCCGAAATAAAAGGCGGGTGG ACGATTATTGCCTCACACAAGGAACATAGGCATGACCAGAACTTCGAACCCATGCGCAGTGGTATTGGCCTTTGCGGCAATTGCCGCTTCGGGAACCGCG
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DNA Sequence for Gene |
>Q068_02467
ATGGCGGCAAACACTATCACATTCAGCGGCGAAGTGACCGACCAGACCTGCCAGGTCGCGGTCAACGGCTTCACCGACCCCACGGTGATCCTCGACAGCG TACCGGTGAGCGCCCTCGATGGCGCAGTGGGCCGCAGCGCCGGCGAAACCGCCTTCACCCTGCAACTCACCGATTGCGTCGCGCCGACGGCCGACGAGCA TTTCACCACCCTGTTCCAGGCCACCAACCCCAGCGCCGCCGGGAATCTGGTGAACACCGCCGCCAGCGGCGCGACGGGCGTGGCGCTGCAATTGCTCGAT AGCGTCGGCGGCAACCCGGTCGACCTGGCCGGCGGCGCGGCGGTGCCCGCCGGCGACATCGTGCTCGCCAACGGAGCCACCAGCACCAGCTACGACTACG CGGTGCAGTACGTCTCCGAAGCGGCGACCGTGACGCCCGGTCCGGTACTCGGCGCCGTGACCTACACGCTGCGTTACGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGCCGGCGGCGCATGCGCCGCCCCTTCCTTTTCCCAGCACTAAAGCCGGGCCCGGTCGCTGGACCGTGCCCGGCCAGGTAAGCCGCATGCCCAGACATT CGTACCGATCCGGCAGGACATCGGCGCTTCTGCTCGTCCTGCTGGCGAGCATCGCCCAGGCGCGGGCAAGCGTGGTGGTGACCGGGACCCGGGTGATCTA TCCCGGCGAGGCACGGGAGAAGACCGTGCAACTGAGCAATCGCGATGCGTTTCCCAACGTCGTCCAGGCCTGGGTCGACATCGACGCCCCGGACGCGCCG CCGGACCAGGCGGACGCGCCGTTCCTGGTCAATCCGGCGGTGTTCCGCATGGCCCCGGACAGCGGCCAGACGCTGCGCATCGTCTACACCGGGCAGGGCC TGCCGGGCGATCGCGAATCGCTGTTCCATCTCAACGTCCTGCAGATCCCGCCACGCAACAGCAGCCATGCGGATCGGAACCAGATGCTGCTGATGCTGCG
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Amino Acid Sequence |
>fimbrial protein
MAANTITFSGEVTDQTCQVAVNGFTDPTVILDSVPVSALDGAVGRSAGETAFTLQLTDCVAPTADEHFTTLFQATNPSAAGNLVNTAASGATGVALQLLD SVGGNPVDLAGGAAVPAGDIVLANGATSTSYDYAVQYVSEAATVTPGPVLGAVTYTLRYE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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