Strain | Pseudomonas aeruginosa BL15 genomic scaffold adgeO-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGGATGACCTACCTGGCGCTGCTGATCCCGCTGGTCAACCTGGTCATGATGCCCGCCGCCGTCGCCGGCGCCACCCTGTTCTGGGTCCGCGAGGAAGG CGAGAAGGCGCTGGTGAAATAAGCATGCGCCCGGTGTCCGCTGTCGGCATTGTCAGGCGGGCGTCAGCGCCCTGACAGCCGGCGTCGGGCACACTACGAA TGCCCTCGGGAGCGTCGGCGCAGGCCGCAGCCGAGACCTGCGCCAGCCCTTGCAGACCGGCTCGACGCTGCCGAACCGACTGGCCGCCGGTGCCTCCCCA CGCAGGCGGCCTTTTTTTACCCGCCGGCCTTGCCGTCCATGCAGGATGGCCGGCGCTCACCCCCTTCCTGTCCGCTACGCCCCCCCTCGACGCCGCCACC CTGGCACTACAGTGGCAACCAGGCGAGGCAGGCTCCGGCCCGCTTTCGATGACCACCGTCCCCAGCCCGCCCAGCGGCGGAAAACAAGAAGAGGGTCGCC
|
|
DNA Sequence for Gene |
>Q069_03520
ATGTCACGTTCCGCATTCACCGCGCTCTTGCTGTCCTGCGTCCTGCTGGCGCTCTCCATGCCTGCCAGGGCCGACGACCTGCCCTACCGCTTCGGCCTGG GCAAGGCGGACATCACCGGCGAAGCCGCCGAAGTCGGCATGATGGGTTACTCCTCCCTCGAACAGAAGACCGCCGGCATCCACATGCGCCAGTGGGCGCG TGCCTTCGTGATCGAGGAACCGGCCAGCGGACGTCGCCTGGTCTACGTCAACACCGACCTGGGGATGATCTTCCAGGCCGTGCACCTGAAGGTCCTGGCC CGGCTCAAGGCGAAGTACCCCGGTGTCTACGACGAAAACAACGTGATGCTCGCCGCCACCCACACCCACTCCGGTCCGGGCGGCTTCTCCCACTACGCGA TGTACAACCTGTCGGTGCTCGGCTTCCAGGAAAAGACCTTCAACGCCATCGTCGACGGCATCGTCCGCTCCATCGAGCGGGCCCAGGCCAGGTTGCAGCC CGGCCGCCTGTTCTACGGCAGCGGCGAGCTGCGCAACGCCAGCCGCAACCGCTCGCTGCTGTCGCACCTGAAGAATCCGGACATCGCCGGCTACGAGGAT GGCATCGACTCGCAGATGAGCGTGCTCAGCTTCGTCGACGCCAACGGCGAGCTGGCCGGCGCGATCAGTTGGTTCCCGGTGCACAGCACCTCGATGACCA ACGCCAACCATCTGATCTCGCCGGACAACAAGGGCTACGCCTCCTATCACTGGGAGCACGACGTCAGCCGCAAGAGCGGTTTCGTCGCCGCCTTCGCCCA GACCAATGCCGGCAACCTGTCGCCCAACCTGAACCTGAAGCCCGGCTCCGGTCCCTTCGACAACGAGTTCGACAACACCCGCGAGATCGGTCTGCGCCAA TTCGCCAAGGCCTACGAGATCGCCGGCCAGGCCCAGGAGGAAGTGCTCGGCGAACTGGATTCGCGCTTCCGTTTCGTCGACTTCACCCGCCTGCCGATCC GCCCGGAGTTCACCGACGGCCAGCCGCGCCAGTTGTGCACCGCGGCCATCGGCACCAGTCTGGCCGCCGGTAGCACCGAAGACGGTCCAGGCCCGCTGGG GCTGGATGAAGGCAACAATCCGTTCCTCTCGGCCCTTGGCGGGTTGCTCACCGGCGTGCCGCCGCAGGAACTGGTGCAATGCCAGGCGGAAAAGACCATC CTCGCCGACACCGGCAACAAGAAACCCTACCCCTGGACGCCGACGGTGCTGCCGATCCAGATGTTCCGCATCGGCCAGTTGGAACTGCTCGGCGCCCCCG CCGAGTTCACCGTGATGGCCGGGGTGCGGATCCGCCGCGCGGTGCAGGCGGCCAGCGAAGCGGCCGGTATCCGCCATGTGGTCTTCAATGGCTACGCGAA TGCCTATGCCAGCTACGTCACCACCCGCGAGGAATACGCCGCCCAGGAATACGAAGGCGGCTCGACCCTCTACGGCCCCTGGACCCAGGCCGCCTACCAG CAGTTGTTCGTCGACATGGCGGTGGCGCTGCGCGAACGCCTGCCGGTGGAAACCTCGGCGATAGCGCCGGACCTGTCCTGCTGCCAGATGAACTTCCAGA CCGGAGTAGTGGCCGATGATCCCTATATCGGCAAGTCCTTCGGCGACGTGTTGCAACAACCCAGGGAAAGTTATCGCATCGGCGACAAGGTGACCGTCGC TTTCGTGACCGGACATCCGAAGAATGACTTGCGCACCGAGAAGACTTTCCTGGAAGTGGTGAATATCGGCAAGGATGGCAAACAGACGCCCGTGACCGTT GCCACCGATAATGACTGGTATACCCAATACCGCTGGGAGAGAGTGGGTATATCTGCCTCGAAAGCGACTATCAGCTGGTCCATTCCACCAGGGACCGAGC CCGGCCATTACTACATCAGGCACTATGGCAACGCGAAGAACTTCTGGACCCAGAAGATCAGCGAAATCGGCGGCTCGACCCGCTCCTTCGAGGTGCTCGG CACCACTCCCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGGGCTCCAGCCAAGGTTGCGAGATTCGCCAGCCAACTTTATGACGCATGAAAGTCGTCAAATAAAATGTGATTTAAAACACATGAACAAGTGACCTTTC ATTCAGCCGACAAGGGCATGGAACTCCATTTCCATGCCCTTTGTTTTTATCCCGAAAAACTTCTCAAGTTGTCGCTCAAGATCATATCGAAGTCGCTTTC GGGATCAACCGATAAATTATCGCCATGAAACCATCGACTCGCTGTATTCCCTGCCGGAAAAACAGGGAAGACGATTAATCATCTCGAAACAAGAAGTACG CAGATTGATGGAAATCAAAAAACCACCCGGGAAATAAAACGATGACCGAAAACTGGAAATTCCGCCGTCGAACCTTTCTCAAGCACGGCGCCCAGGCCGC TACCCTGGCCGGCCTTTCCGGGCTGTTCCCGGAGACGCTCCGGCGCGCCCTGGCCATCGAGCCGGACATCCGCACCGGAACCATCCAGGACGTCCAGCAC
|
|
Amino Acid Sequence |
>neutral ceramidase
MSRSAFTALLLSCVLLALSMPARADDLPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEPASGRRLVYVNTDLGMIFQAVHLKVLA RLKAKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNPDIAGYED GIDSQMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPNLNLKPGSGPFDNEFDNTREIGLRQ FAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLDEGNNPFLSALGGLLTGVPPQELVQCQAEKTI LADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGVRIRRAVQAASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQ QLFVDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQPRESYRIGDKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPVTV ATDNDWYTQYRWERVGISASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRSFEVLGTTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|