Strain | Pseudomonas aeruginosa BL15 genomic scaffold adgeO-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGCGCCTGGGCTGGTTCACCATGCTGGTGCTGTTCGACCAGCGCGTCTCGATGTGGACCAGCCTGCTCGGCCTGGTGGTGGCGATCCTCGCCAGCCTC AAGTACAGCATCGCCTTCCTGCTGGTGTACCTGCTCTGGATCGGCCTCACCCGCCTGGTGCTGACCCTGCTCCTCTCGCTGTCCGGGCACCGCATCGGCC CGGCCTATCCGCTGATCCTCTATTACAACCAGATCGTCGGCGCGCTGGTGAAGATCTACGTGTTCTTCCGCCTCGACCGGCAGTCCTGGACCCGCCAGCC GACCAAGCTGGAGCGCGGCCTGGCCAGCTTCCAGCGCTGGTTCAACGCCTGGTCGTCGCGGGCCATGACCTTCTCTGCCGCCAGCATCTTCGTCGCCGTG CTGCTGACCATCGTATGACCACCGAATCGACTACGGACAACGCCAGGGCCGCGGCCCGCGCGCAAATCGACCCAGATTGGACCGAACAGGACCCGACACC
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DNA Sequence for Gene |
>Q069_00785
ATGAATACAGCCGTCAACGTCAACGTCGTGCACGAATCCGAAGCCCAGCGCCAGTTCGCCCGGGTCAAGCTGCCGGCGCGCATCCGCTACATCGGCGCCA ACCGCGAAGGCGTCGACGCACGCCTGCTGGATCTCTCCGCCGGCGGCTTCGCCTTCACCGCGAGCGGCGCGCCGATCCAGCCAGGCGACCTGTACAAGGG CAAGCTGCTGTTCCAGGTCGACAGCATCAGCTTTTCCCTCGAAGTGGAGTTCCAGGTGCGCTCGGTGGACCCCGCCAGCCGCCGCGTCGGCTGCGAGTTC CAGAACCTCAAGCCGCGCGAGGTGGCGGCCCTGCGCTACCTGATCACCTCCTACCTGGCCGGCGAGGTGATCGGCGTCGGCGACATGCTCAATACCCTCC AGCGCGAGAACTTCACCAAGGCCCGCAAGCAGGGCGGCGGCAACGGCGGGATGGGCTTCTTCGGCCGGGTCCGGGCGGTGACCCTGAGCACCGCGATCTT CGTCGTCGGGGTCGGCGCCTTCGCCTTCATCCTCAACCAGATGTACAACCTGTACTTCGTCACCCATGCCGATTCCGGCGTGGTCAGCGTCCCCAACCAG CAGATCACCATGCCCCGCGAGGGCACCGTGCAGAGCCTTCTCGGGCCCAACGCGGAAGTCGCCAAAGGCGCGCCGATCGCTACCTTCTCGGCCAACCTGC TGGACATGCTCAAGGGCAACCTGACCGAGGAGCAGCTCAACCCGGGCAACATCGAGAAGCTCTTCGGCCACCAGATGAAAGGGACCCTGACCAGCCCCTG CGACTGCCGCGTGGTCCAGCAACTGGTAGCCGACGGGCAATACGCCAACAAGGGCCAGGTGATCTTCACCCTCGCCCCGCGCGACAGCGTGGCCAGCATC GAGGCGCGCTTCCCCTACCGCAACGCCGCCGAGCTGGCGCCGGGCACCCGGGTGAACTTCCAGGTCGCCGGCGACGGCGTCAACCGCAGCGGCCGCATCG TCAACACCGCGCCGGTGGACGGCGACCTGTCCTCGGAAATCCGCGTGCAGATCCAGCCCGACCAGCCGCTCGACGCCCAGTACGCCGGCCGCCCGGCCGA GGTCAGCATCGGCGGCCTGCCCGGCCGCACCCTGCTGAACAAGGCCGTGACCCTGGCCACCGCTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGTACCCGACCATGAAGATGCCCATCCTCCCTCCCCTGCCCCTGGCGTCCCGGCACCTGCTGCTGGCCTCGGCCATCGCCCTGGCCGCCGGCTGCGCC GGGCTGCCCGACCAGCGCCTGGCCCAGGAGGCCCTGGAGCGCGGCGACCTCGCCACCGCCCAGAGCAACTACCAGGCCCTGGCCGCGATGGGTTACGCCG ACGCCCAGGTCGGCCTCGCCGACATGCAGGTCGCCAGCGGCGACAGCGCCCAGCAGGCCAAGGCCGAAAAGCTCTACCGCGAGGCCGCGCAGACCTCGCC GCGGGCCCGCGCGCGCCTTGGCAAGTGGCTGGCTGCCAAGCCCGGCGCCAGCGACGCCGAGCACCGCGAGGCCGAGCGCCTGCTCAGCCAGGCCTTCGAA CAGGGCGAGGACAGTGCCCTGGTGCCGCTCATCGTGCTCTACCTGCAATACCCGCAGTCCTGGCCGGAAATCGACCCGCAGCAGCGCATCGACCAGTGGC
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Amino Acid Sequence |
>hemolysin D
MNTAVNVNVVHESEAQRQFARVKLPARIRYIGANREGVDARLLDLSAGGFAFTASGAPIQPGDLYKGKLLFQVDSISFSLEVEFQVRSVDPASRRVGCEF QNLKPREVAALRYLITSYLAGEVIGVGDMLNTLQRENFTKARKQGGGNGGMGFFGRVRAVTLSTAIFVVGVGAFAFILNQMYNLYFVTHADSGVVSVPNQ QITMPREGTVQSLLGPNAEVAKGAPIATFSANLLDMLKGNLTEEQLNPGNIEKLFGHQMKGTLTSPCDCRVVQQLVADGQYANKGQVIFTLAPRDSVASI EARFPYRNAAELAPGTRVNFQVAGDGVNRSGRIVNTAPVDGDLSSEIRVQIQPDQPLDAQYAGRPAEVSIGGLPGRTLLNKAVTLATAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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