Pseudomonas aeruginosa PAO1, PA2398 (fpvA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0002049 pyoverdine biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 12029043 Reviewed by curator
Biological Process GO:0006810 transport
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Molecular Function GO:0038023 signaling receptor activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 1903349 Reviewed by curator
Molecular Function GO:0038023 signaling receptor activity
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 15968062 Reviewed by curator
Molecular Function GO:0038023 signaling receptor activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 8335619 Reviewed by curator
Molecular Function GO:0038023 signaling receptor activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 18641139 Reviewed by curator
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00965
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015343 siderophore transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0038023 signaling receptor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015891 siderophore transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.170.20 - IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 273 815 0.0
NCBIfam TIGR01783 JCVI: TonB-dependent siderophore receptor IPR010105 TonB-dependent siderophore receptor 164 815 1.5E-104
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 375 813 1.2E-44
SUPERFAMILY SSF56935 Porins - - 152 815 7.75E-124
CDD cd01347 ligand_gated_channel - - 168 815 1.08523E-130
SMART SM00965 STN_2 IPR011662 Secretin/TonB, short N-terminal domain 68 118 1.4E-9
PANTHER PTHR32552 FERRICHROME IRON RECEPTOR-RELATED IPR039426 TonB-dependent receptor-like 130 815 0.0
Gene3D G3DSA:2.170.130.10 - IPR037066 TonB-dependent receptor, plug domain superfamily 139 272 1.1E-31
Pfam PF07660 Secretin and TonB N terminus short domain IPR011662 Secretin/TonB, short N-terminal domain 69 116 1.1E-7
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 162 264 7.5E-17
Gene3D G3DSA:3.55.50.30 - - - 44 136 4.2E-28
FunFam G3DSA:2.170.130.10:FF:000010 Ferripyoverdine receptor - - 140 272 2.1E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.