Pseudomonas aeruginosa PAO1, PA2391 (opmQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGCCGAACGCGCCATCGACCAGTTGATGCTGCGCCTGCACCGCGGCCAGCGCGACTACGAGCTGACCAACAACGCGGCGATGATCCAGGCCGAGGCGA AGACCCAGAACACCCTGTCGCTGATGCTCGGCTCGATCGCCGCGATCTCCCTGCTGGTAGGCGGGATCGGCGTGATGAACATCATGCTCATGACCGTGCG CGAACGCACCCGCGAGATCGGCATCCGCATGGCCACTGGCGCCCGCCAGGGCGATATCCTCCGCCAGTTCCTCACCGAGGCGGCGATGCTCTCGGTGGTC GGCGGCCTGGCCGGGATCGCCCTGGCCCTGTGCATCGGCGGCGTGCTGCTGCTCGGCCAGGTCGCGGTGGCCTTTTCCCTGTCGGCCATCGTCGGCGCCT TCAGTTGCGCGCTGGTCACCGGCCTGGTGTTCGGCTTCATGCCGGCGCGCAAGGCCGCCCAGCTGGACCCGGTGGCCGCCCTGGCCAGCCAATGACGGAT
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| DNA Sequence for Gene |
>PA2391
|opmQ
ATGTCCATGAAGAATCTCTCCCTGATTTCCGCCTGCCTGCTGCTCGGCGCCTGCGGCAGCACGCCGGCGCCCCTCGACAGCGGCCTGGCCGCGCCCAGCC AGTGGCGCTACCTGGCGGCCGGGCGCAGCGATGCCAGCGACATCCGCCAGTGGTGGAAGGCCTTCGGCGCGCCGGAACTGGACAGCCTGCTGCAACGCGC CCTGCTGAACAGCCAGGACCTCGGCGCGGCGGTGGCCCGCGTACGCCAGGCCCAGGCCTCGGCGGTGATCGCCGGCGCGCCGTTGCTGCCGGAGCTGAAT GCGACGCTCGGCGCCAGCCGGCAGAAACTCCTGCGCGACTCGGGCTACAGCGGTACCGACGCGACCTCCGACAACGATGCCGTCGACTCCTTCTCCGCCG GCCTCAGCGCCAGCTACGAAGTGGACTTCTGGGGCGGTCGCCAGGCTGCCTACCGCAGCGCCCTGGAAAGCCTCAAGGCCAGCGAGTACGACCGCGCCAC GGTAGAGCTGACCCTGCTCTCCGGCGTCGCCAACAGCTACCTGCAGGTATTGGCGCTGCGCGAACAGCAGCGCATCGCCAGGCTCAACCTGGACAACGCC GAGCACGTCCTGCGCCTGGTGGAGACCCGCCATGCCGCGGGCTCGGCCACCGCCCTGGAGGTCGCCCAACAGAGCAGCCTGGTCGCCAGCCAGCGCAAGC AGCTGCCGCTGCTCGAGCAGCAGGCCCATGAGGCGCTGATTACCCTGGCCACCCTGATCGGCGAGCCGGTGCAGGCGCTACAGGTGGCCGAGCGGCCTTT CGACAGCCTGCGCTGGCCGGAGACCGGAGCGGGCCTGCCGAGCGAACTGCTCAGCCGCCGTCCCGATATCGCCAACGCCGAAGCGCAACTGGCCGCGGCC CAGGCCGACGTGCAGGTGGCGCGCGCGGCGCTGTTCCCCAAGCTGACCCTGAGCGCCTCGCTGTCGTCCGGCGCCAACCGCGCCGCCGACACTTTCCGCA ACCCCTATTACAACCTGGGCGCCAACCTGCTCGCCCCGATCTTCAACCACGGCCGCCTGCGCGCCGAGCGCGACCGCAGCCTGGCGCGCCAGGAAGAACT GCTGGAAACCTACCGCAAGGCGATCCTCACCGCCTTTGCCGACACCGAACGCTCGCTGAACAGCATCGACGGCCTCGACCGCCAGCTGCACTGGCAACAG CAGGAGCTGGAGCAGGCGCAGCGCGCCTTCGATCTCTCCGACAGCCGCTACCAGGCCGGCGCGGAAACCCTGCTGACGGTCCTCGAAACGCAACGCACGC TGTACGCGGCGCAGGATGCCGCCGTGCAACTGCGACTGGCCCGCCTGCAGGCCTCGGTCGGCCTGTACAAGGCCCTCGGCGGCGGCTGGCAGAGCGACCG CCAGGGTCTCGCGCGGAAAGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCCGCGTTGCGCGGGCCTCCTCCATCCTTACTCGCTCTTTCGCCGCTCAGCGCCTGAGCTGGTCGCGCGCCAGCTTCAGGTTGCGCGCGTACCAGGGC CGCCGCGGCGCACGCTTGAGCCAGCCGCTCAGTTGATCTTCTTCGCTGAAGATGATGCGCAAAGCCAGCTTCATGGTTTCCACGTCCAGCTCCACCGAGT TGCTGCTCGCCTGGACATCCGAGAGCCCGCATCCATGGGTCGCCGGGCCCAGCCAGGGATCGCCGACCTCGACCCATCGACCGGGCGCGAACCATTGGAT GCCCTCCACTTCGCGGCGCTGCACTTCGCCAGGATGGAAACGCTCGTGGGCGCGATACCAGTCCTCGATGCGGTCGTCGATCCAGCCGTGGAACGACCAG AACACCGGATTCACATGGGAGGAAAACGGGTCGCCGAGGAAGTCGTTCTCCGGGCGGAACCAGCGCGGGGCGAAATCGGCCGGAAAACGGTCGGTCATGA
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| Amino Acid Sequence |
>probable outer membrane protein precursor
MSMKNLSLISACLLLGACGSTPAPLDSGLAAPSQWRYLAAGRSDASDIRQWWKAFGAPELDSLLQRALLNSQDLGAAVARVRQAQASAVIAGAPLLPELN ATLGASRQKLLRDSGYSGTDATSDNDAVDSFSAGLSASYEVDFWGGRQAAYRSALESLKASEYDRATVELTLLSGVANSYLQVLALREQQRIARLNLDNA EHVLRLVETRHAAGSATALEVAQQSSLVASQRKQLPLLEQQAHEALITLATLIGEPVQALQVAERPFDSLRWPETGAGLPSELLSRRPDIANAEAQLAAA QADVQVARAALFPKLTLSASLSSGANRAADTFRNPYYNLGANLLAPIFNHGRLRAERDRSLARQEELLETYRKAILTAFADTERSLNSIDGLDRQLHWQQ QELEQAQRAFDLSDSRYQAGAETLLTVLETQRTLYAAQDAAVQLRLARLQASVGLYKALGGGWQSDRQGLARKD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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