Pseudomonas aeruginosa PAO1, PA2367 (hcp3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGAACAGCGACGTGGCGGTGTTCTTCGGCGGCCAGACCACCAACAAGGCCAGGCTCTACAACACCAACGAGGCCAACGCCAACGCGCGCCTGTCGGCG ATGCTGCCGTACGTGCTGGCGGCATCGCGCTTCGCCCACTACCTGAAGGTGATCATGCGCGACAAGGTCGGCAGCTTCATGACCCGCGACAACGTGCAGA CCTACCTGAACAACTGGATCGCCGACTACGTGCTGATCAACGACAACGCACCGCAGGAAATCAAGGCGCAGTACCCGCTGCGCGAGGCGCGGGTGGATGT CAGCGAGGTGGCCGGCAAACCGGGAGCCTACCGCGCCACGGTGTTCCTCCGGCCGCACTTCCAGCTCGAGGAACTCAGCGCGTCGATCCGCCTGGTCGCC AACCTGCCGCCGCCGGTAGCGGCGTGAGTCCGCCCCCGCCGGCAGCGCCGGCGGGGCGCCCTTCCCGTTCCAGACAGCCCCTCTCCAGGAGTCAGATGCG
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| DNA Sequence for Gene |
>PA2367
|hcp3
ATGGATGCGATCATTCTCGATTTCGGCAGCGACATCAAAGGCGACAGCCTGCTCGTCGGCTACGAAAACAAGATCGAAATCATGTCCTACAGCCACAACG TGGCGATGCAGGTCACCAACGACGTCAGCAACTCGGAGCGCACCTCCGGCAAACCCCACGTCGGCGAATTCACCCTCACCAAGTTCATCGACACCTCGAC CCCGACCCTCAACGAGTATTGCTGCGCCGGCAAGCCGATCGCCGAGGCGACCATCACCATCGGCCGCAACGCCGCCGAGGGCAACGGGCAGATCATGCCC TTCATCGTCTACACCCTGAACAACGTGGTGCTCTCCAACGTCAGCGTCAGCGGCGGCGCCGGCGGCAAGCCGGTGGAGACCCTGTCGCTGAACTTCACCA AGATCAAGTGGGAGCTGACCGCGCAGAAGGACGACGGCACCAAGGAAGGCACGGCCGCCTCAACCTGGGACCTGGCCGCCAACCAGTTGGTCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGGCGCCGACATGTCCGGAGCCCTGCCGCCGCTGTTCGAGCGCCTCAGCGCCGAGGCCGACGAACGTCCCGCGTTCGACGACCGGGCGCTGGCCGAGT CGGTCCGCGGCGAGCTGCTGCGCCTGCTCAACACACGGCGCCCGGCGAATGCGCGCAGCGGCATCCTCGCCTACGGGCTCGCCGACTGGACCGCCGTGCA ACGCCTGCGCGCCGAGGACCGACGCCAGCTGGCGCGCGAGGTGCGGGCGGCGGTCGAGCATTTCGAGCCGCGCCTGCAACTGGCCGAGGTCGAGGTCGAA CCTGACCCGGGCAATCCGCAGCGCCTGCGTATCCAGCTCGGCGGCAGCCTGCGCAGCGGGTCGCGCCTGACGCCTGCGCTATTCGTCATCGAACAGGGCT GCGATGGCCTTGAGGTGCGCCATGAGCGATTCGATTGATGCCGACCTGCTCGACTACTACCAGCGCGAGCTGACCTGGCTACGGCACGCCGGCGGCGCCT
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| Amino Acid Sequence |
>Hcp3
MDAIILDFGSDIKGDSLLVGYENKIEIMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLTKFIDTSTPTLNEYCCAGKPIAEATITIGRNAAEGNGQIMP FIVYTLNNVVLSNVSVSGGAGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDLAANQLVK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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