Strain | Pseudomonas aeruginosa BL16 genomic scaffold adgeK-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGGATGACCTACCTGGCGCTGCTGATCCCGCTGGTCAACCTGGTCATGATGCCCGCCGCCGTCGCCGGCGCCACCCTGTTCTGGGTCCGCGAGGAAGG CGAGAAGGCGCTGGTGAAATAAGCATGCGCCCGGTGTCCGCTGTCGGCATTGTCAGGCGGGCGTCAGCGCCCTGACAGCCGGCGTCGGGCACACTACGAA TGCCCTCGGGAGCGTCGGCGCAGGCCGCAGCCGAGACCTGCGCCAGCCCTTGCAGACCGGCTCGACGCTGCCGAACCGACTGGCCGCCGGTGCCTCCCCA CGCAGGCGGCCTTTTTTTACCCGCCGGCCTTGCCGTCCATGCAGGATGTCCGGCGCTCACCCCCTTCCTGTCCGCTACGCCCCCCCTCGACGCCGCCACC CTGGCACTACAGTGGCAACCAGGCGAGGCAGGCTCCGGCCCGCTTTCGATGACCACCGTCCCCAGCCCGCCCAGCGGCGGAAAACAAGAAGAGGGTCGCC
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DNA Sequence for Gene |
>Q070_03610
ATGTCACGTTCCGCATTCACCGCGCTCTTGCTGTCCTGCGTCCTGCTGGCGCTCTCCATGCCTGCCAGGGCCGACGACCTGCCCTACCGCTTCGGCCTGG GCAAGGCGGACATCACCGGCGAAGCCGCCGAAGTCGGCATGATGGGTTACTCCTCCCTCGAACAGAAGACCGCCGGCATCCACATGCGCCAGTGGGCGCG TGCCTTCGTGATCGAGGAAGCGGCCAGCGGACGTCGCCTGGTCTACGTCAACACCGACCTGGGGATGATCTTCCAGGCCGTGCACCTGAAGGTCCTGGCC CGGCTCAAGGCGAAGTACCCCGGTGTCTACGACGAGAACAACGTGATGCTCGCCGCCACCCACACCCACTCCGGTCCGGGCGGCTTCTCCCACTACGCGA TGTACAACCTGTCGGTGCTCGGCTTCCAGGAAAAGACCTTCAATGCCATCGTCGACGGCATCGTCCGCTCCATCGAGCGGGCCCAGGCCAGGTTGCAGCC CGGCCGCCTGTTCTACGGCAGCGGCGAGCTGCGCAACGCCAGCCGCAACCGTTCGCTGCTGTCGCACCTGAAGAATCCGGACATCGCCGGCTACGAGGAT GGCATCGACCCGCAGATGAGCGTGCTCAGCTTCGTCGACGCCAACGGCGAGCTGGCCGGCGCGATCAGTTGGTTCCCGGTGCACAGCACCTCGATGACCA ACGCCAACCATCTGATCTCGCCGGACAACAAGGGCTACGCCTCCTATCACTGGGAGCACGACGTCAGCCGCAGGGCCGGTTTCGTCGCCGCCTTCGCCCA GACCAATGCCGGCAACCTGTCGCCCAACCTGAACCTGAAGCCCGGCTCCGGTCCCTTCGACAACGAGTTCGACAACACCCGCGAGATCGGTCTGCGCCAA TTCGCCAAGGCCTACGAGATCGCCGGCCAGGCCCAGGAGGAAGTGCTCGGCGAACTGGATTCGCGCTTCCGTTTCGTCGACTTCACCCGCCTGCCGATCC GCCCGGAGTTCACCGACGGCCAGCCGCGCCAGTTGTGCACCGCGGCCATCGGCACCAGTCTGGCCGCCGGTAGCACCGAAGACGGTCCAGGCCCGCTGGG GCTGGATGAAGGCAACAATCCGTTCCTCTCGGCCCTTGGCGGGTTGCTCACCGGCGTGCCGCCGCAGGAACTGGTGCAATGCCAGGCGGAAAAGACCATC CTCGCCGACACCGGCAACAAGAAACCCTACCCCTGGACGCCGACGGTGCTGCCGATCCAGATGTTCCGCATCGGCCAGTTGGAACTGCTCGGCGCCCCCG CCGAGTTCACCGTGATGGCCGGGGTGCGGATCCGCCGCGCGGTGCAGGCGGCCAGCGAAGCGGCCGGTATCCGCCATGTGATCTTCAATGGCTACGCGAA TGCCTATGCCAGCTACGTCACCACCCGCGAGGAATACGCCGCCCAGGAATACGAAGGCGGCTCGACCCTCTACGGCCCCTGGACCCAGGCCGCCTACCAG CAGTTGTTCGTCGACATGGCGGTGGCGCTGCGCGAACGCCTGCCGGTGGAAACCTCGGCGATAGCGCCGGACCTGTCCTGCTGCCAGATGAACTTCCAGA CCGGAGTAGTGGCCGATGATCCCTATATCGGCAAGTCCTTCGGCGACGTGTTGCAACAACCCAGGGAAAGTTATCGCATCGGCGACAAGGTGACCGTCGC TTTCGTGACCGGACATCCGAAGAATGACTTGCGCACCGAGAAGACTTTCCTGGAAGTGGTGAATATCGGCAAGGATGGCAAACAGACGCCCGTGACCGTT GCCACCGATAATGACTGGTATACCCAATACCGCTGGGAGAGAGTGGGTATATCTGCCTCGAAAGCGACTATCAGCTGGTCCATTCCACCAGGGACCGAGC CCGGCCATTACTACATCAGGCACTATGGCAACGCGAAGAACTTCTGGACCCAGAAGATCAGCGAAATCGGCGGCTCGACCCGCTCCTTCGAGGTGCTCGG CACCACTCCCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGGCTCCAGCCAAGGTTTCGAGATTCGCCAGCCAACTTTATGACGCATGAAAGTCGTCAAATAAAATGTGATTTAAAACACATGAACAAGTGACCTTTC ATTCAGCCGACAAGGGCATGGAACTCTATTTCCATGCCCTTTGTTTTTATCCCGAAAAACTTCTCAAGTTGTCGCTCAAGGTCATATCGAAGTCGCTTTC GGGATCAACCGATAAATTATCGCCATGAAACCATCGGCTCGCTGTATTCCCTGCCGGAAAAACAGGGAAGACGATTAATCATCTCGAAACAAGAAGTACG CAGATTGATGGAAATCAAAAAACCACCCGGGAAATAAAACGATGACCGAAAACTGGAAATTCCGCCGTCGAACCTTTCTCAAGCACGGCGCCCAGGCCGC TACCCTGGCCGGCCTTTCCGGGCTGTTCCCGGAGACGCTCCGGCGCGCCCTGGCCATCGAGCCGGACATCCGCACCGGAACCATCCAGGACGTCCAGCAC
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Amino Acid Sequence |
>flagellin biosynthesis protein FlgM
MSRSAFTALLLSCVLLALSMPARADDLPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLA RLKAKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNPDIAGYED GIDPQMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRRAGFVAAFAQTNAGNLSPNLNLKPGSGPFDNEFDNTREIGLRQ FAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLDEGNNPFLSALGGLLTGVPPQELVQCQAEKTI LADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGVRIRRAVQAASEAAGIRHVIFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQ QLFVDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQPRESYRIGDKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPVTV ATDNDWYTQYRWERVGISASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRSFEVLGTTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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