Pseudomonas aeruginosa BL16, Q070_01065

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BL16 genomic scaffold adgeK-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTATCGGACCGTTGAACGTTACCTGCATCCAGGCGCCGGTATTCTTCGGCGACAGCCTCAGCGTGACCCTGCAGTGCGCGGAACCGGTGGACCTGGCCGC GGTGACGCGGGTCCTCGATGCGACGAAAGGTATCGAATGGGTCGGCGAGGGCGATTATCCGACGGTGGTCGGCGATGCCCTCGGCCAGGACGAGACCTAT GTCGGCCGGGTGAGGGCGGGGCAGGCTGATCCCTGTCAGGTCAATTTGTGGATTGTGTCTGATAATGTGCGAAAAGGTGCCGCGCTGAATGCCGTGCTCC TGGGTGAGTTGTTGATAAAACACTATCTGTAAAAGATACTTACCCACAGATTTGTAGAATTATTCGAGCTTGTTAATACTGGTTCGATCCGCTGCTGCCG GGGAGCGTCCGTCCATGCATGGCTGGGCGAGCGGACAGCAAGCACCGACGCACTCCCTCTCGTGAAACGAGAAAAGATATTAAAACCAAGGGATTACACT
DNA Sequence for Gene
>Q070_01065
ATGGTTCGGCTTCGTACACTGGTTCGGGCAATCGCGGCGGCCTCGGTCCTGACTTCCGGCATGGCGCATGGATTGGGACTGGGGGAAATCACCCTGAAGT CGGCGTTGAACCAACCGTTGGATGCCGAGATCGAGCTGCTCGAAGTTCGTGACCTGGGTTCGGGCGAGGTGATCCCGAGCCTGGCGTCGCCGGAAGAGTT CAGCAAGGCGGGCGTCGATCGCCTGTACTACCTCACCGACCTGAAGTTCACGCCGGTGGTGAAGCCCAACGGCAAGAGCGTCATTCGCGTGACCTCGTCG AAGCCGGTGCAGGAGCCCTACCTGAACTTCCTGGTCCAGGTGCTCTGGCCGAACGGCCGCCTGCTGCGCGAGTACACCGTCCTGCTGGATCCGCCGCTGT ACTCCCCGCAGGCCGCGGCAAGCGCTCCGCAAGCGCCGGTCAGCGCGCCGCGCGCGACCGGCGCCCCGCGAACCCCGCAGGCGCCGGCTCCGGTGCGTAC CACCGCGCCGGCAGGCAGCGACACCTATCGCACCGTTTCCAACGACACGCTCTGGGAGATCGCCCAGCGCAACCGTACCGATCGCGTTTCCGTACCCCAG GCGATGCTCGCGTTCCAGGAACTGAATCCGGGCGCCTTCGTCGATGGCAACATCAACCGGCTGAAGAGCGGCCAGGTCCTGCGCATTCCCACCGAACAGC AGATGCTGGAGCGCTCGCCGCGCGAGGCGCTGTCCCAGGTGCAGGCGCAGAACCAGAGCTGGCGCGGCAGCCGCAATCCGGCCGCGGGCACCGCTGGCGC CAGGCAGTTGGATGCGACCCAGCGCAATGCCGCCGGGTCGGCGCCATCCAAGGTCGACGCCACGGACAACCTGCGCCTGGTGTCTGGCGAGGGCAAGGCC AGCAAGGGTGCCGACAAGGGCGGGAAGGGCGACAGCAAGGCGATCGCCGATACCCTGGCGGTGACCAAGGAAAGCCTCGATAGCACTCGCCGCGAGAACG AAGAACTGCAGAGCCGCATGCAGGATCTGCAGAGCCAGCTGGACAAGCTGCAGAAGTTGATCCAGTTGAAGGACGCCCAGTTGGCCAAGCTGCAAGGGCA GTTGGGCGCCGAAGGCCAGGGCGCAGCCCAGCCGAACGCAGCCCTGCCGGATGCGTCCCAGCCCAATGCAGCCGCGCAGGCGCCGGCTCAGCCCGGGACT CCCGCTGCGGCAGCGCCGACTCCTGCTCCGGCCGGAGAAGCACCCGCCGCTCCGGCGCAGCCTCCGGTGGCGCCGCCGCCCGCGCCAGTTGCCGAGAAGC CTCCGGCACCTGCCGTTCCGGCGCCCGCTCCGGTACAGGCGGCAGAACAGCCGGCACCGAGCTTCCTCGACGAACTGCTGGCCAACCCGCTGTGGTTGGC GGTGATCGGCGGTAGTGCACTGCTGGCGTTGCTGGTGCTGCTGATGATCCTGTCGCGGCGCAATGCGCAGAAAGAGAAGGAAGAAGCCCAGGCTTTCGCC GCGGATGCCGGCGAGGAACAGGAGGATGCGCTGGACCTGGGAAAGGACGGCTTCGACGACCTGACCCTCGACGAGCCTGAACCGCAGGTCGCAGCCGCTG CGCCGCAGGTCGAGAAGACCACTGCGCAGACTTCCGATGCGCTGGGCGAGGCCGACATCTATATCGCCTACGGGCGTTTCAACCAGGCCGCCGAACTGTT GCAGAACGCCATCTACGACGAGCCGCAGCGCACCGACCTGCGCCTCAAGCTGATGGAAGTCTATGCCGAGATGGGCGATCGCGAAGGTTTCGCTCGCCAG GAAAACGAGCTGCGCGAAATCGGCGGCGCACAGCCGCAGGTCGAGCAGCTCAAGTCGCGCTACCCGGCAATGGTCGCGGTCGCCGCGGTTGCCGGCCTGG CCGGCGCCAAGCTGGCGCAGGACGAGCTGGATAGCTTCAGCCTCGACGACCTGTCGCTCGACGACAGCGGTCACGCGGCCAAGCCGGATGCGGCAGGACA GGATCTCGACGACGCCTTCGACCTGAGCCTGGACGACCTGGGCGGCGGCGATCTTGGCAGCGACGACGTGCAGGCCGATCTCAAGTCCGACAGCGGGGCG CTGGACGACCTGACCCTGGACAGCGATCTGGACCTGGCGGCCTCGACCGCGGCGGACAAGCCTGTCGACGATCTCGACTTCGGCCTGGATTTCGCGGAGT TGGCAGAGACTCCGAGCCAACCCAAGCATGACGACCTGGGCGATTTCTCCCTGGATCTCGATGCGCCGGAAGACAAGCTTTCGGACGACGACTTCCTGCT TTCGCTGAACGACGAGGTGCCCGCCGCGGCGCCAGCCAACAACGAATTCACCCTCGATACCGAGGCTGCCGAAGAGCCGGCGTTGTCCCTGCCGGACGAC TTCGACCTGTCGCTGGCCGACGAGCCGACGGAGCCGGCCGCTCCGGAGAAGGGCGAGGACAGTTTCGCCGCCCAGTTGGACGAGGTGAGTGCGCAGTTGG ACGAGTTGGCCAGCAACCTTGACGAGCCGAAGAGCGCGGCGCCGAGTTTCTCCGCCGAGGATGCAGCGGTCGCCTCCGCCCTGGACGGAGACGCCGACGA TGACTTCGACTTCCTCTCCGGTGCCGACGAAGCGGCGACCAAGCTGGATCTGGCTCGCGCCTACATCGACATGGGCGATAGCGAAGGCGCGCGCGATATC CTCGACGAAGTCCTGGCCGAAGGTAACGACAGCCAGCAGGCGGAAGCCCGCGAGTTGCTGGAGCGCCTGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGGAAATGAAGCGACCCTCATGAACGATGTTGTTCCGCCAGCGGCAGCCGAATCGGCTGCCGCTGGCGTTTCCAGAATCGCCCTCGGCATCGAGTACA AGGGCTCCCGCTATCGTGGCTGGCAGCGCCAGGAAGCCGGCGTGCCTTCCGTGCAGGAAGCGCTGGAGCGCGCCTTGTCGAAGGTTGCCGCCGAGCCGGT CGGGGTGATCTGCGCCGGCCGTACCGACGCTGCCGTTCATGCCAGCGGCCAGGTAGTGCATTTCGACACCGCGGTGGAGCGCCCGTTGAAAGCATGGGTG ATGGGCACCAACGCCAACCTGCCCGCGGATATCAGTGTGACCTGGGCGAGAGTGATGCCGGCGCATTTCCACGCGCGCTTCTCGGCCATGGCCCGGCGCT ATCGCTACGCCATCTACAACGATCCGATCCGCCCGGCGCACCTGGCCGAGGAGGTCACCTGGAACCATCGGCCGCTGGATATCGGGCGGATGCGCGAGGC
Amino Acid Sequence
>peptigoglycan-binding protein LysM
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLGSGEVIPSLASPEEFSKAGVDRLYYLTDLKFTPVVKPNGKSVIRVTSS KPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRATGAPRTPQAPAPVRTTAPAGSDTYRTVSNDTLWEIAQRNRTDRVSVPQ AMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLERSPREALSQVQAQNQSWRGSRNPAAGTAGARQLDATQRNAAGSAPSKVDATDNLRLVSGEGKA SKGADKGGKGDSKAIADTLAVTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLGAEGQGAAQPNAALPDASQPNAAAQAPAQPGT PAAAAPTPAPAGEAPAAPAQPPVAPPPAPVAEKPPAPAVPAPAPVQAAEQPAPSFLDELLANPLWLAVIGGSALLALLVLLMILSRRNAQKEKEEAQAFA ADAGEEQEDALDLGKDGFDDLTLDEPEPQVAAAAPQVEKTTAQTSDALGEADIYIAYGRFNQAAELLQNAIYDEPQRTDLRLKLMEVYAEMGDREGFARQ ENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKLAQDELDSFSLDDLSLDDSGHAAKPDAAGQDLDDAFDLSLDDLGGGDLGSDDVQADLKSDSGA LDDLTLDSDLDLAASTAADKPVDDLDFGLDFAELAETPSQPKHDDLGDFSLDLDAPEDKLSDDDFLLSLNDEVPAAAPANNEFTLDTEAAEEPALSLPDD FDLSLADEPTEPAAPEKGEDSFAAQLDEVSAQLDELASNLDEPKSAAPSFSAEDAAVASALDGDADDDFDFLSGADEAATKLDLARAYIDMGDSEGARDI LDEVLAEGNDSQQAEARELLERLA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site