Pseudomonas aeruginosa BL16, Q070_00264
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL16 genomic scaffold adgeK-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTGGTGGCTTTCCAGGCCCAGCCGGTGCAAGGCGTTGGCGGTCTGGGTGACGCGGGCGAACAGCTCGGCATAGCTGATCCGCAACGGTTCTTCGGC AGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCGCTGGGCCGAGCGTTGCAACAGTTCGTAGGTGCTGGATGGCAGGTCGCGCTGT TCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGGCGATCGATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGCGGAC ACTCGCCGGATCGCTCCGGCACCGTCCCGAAGATGCCACCCCCGTCGCCGCCCTACCGTTGTCTTTTTGTAGCGCGCCGCCGGTCGCGCGCACGAACCCT CCCGGAGGCTCTCCCGGGAGCTTCGCGCAGCCCCCTCCAGGCCCCGTCCGGCCAAGCCTGGAGGTGACCGGCCAAGCATGGATTTCTCCCCGCTGGCAAC
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| DNA Sequence for Gene |
>Q070_00264
ATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCCGTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGC AGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGAAAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACC GCGCGCCCCGCGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGTTGAAAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGCCAAAGAAGGCCGG GACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAGCCGAAGCCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCA AGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCATCCATGACCTCGGCTTCCCCTACTGCACGCCGATCCAGGCGCAGGTACTGGG CTTCACCCTGCGCGGCCAGGACGCCATCGGCCGCGCCCAGACCGGTACCGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAGTTGCTGCAGACC CCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATCGCCCCGACCCGCGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGA CCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACTTCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGC CACCCCCGGCCGTCTGCTGGACTTCAACCAGCGCGGCGAGGTGCACCTGGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATG GGCTTTATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAGGGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGA ACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGCCGGAGAACGTCGCCAGCGATACCGTCGAGCAGCATGTCTACGCCGTGGCCGG CAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCGCAGAACAACTGGGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAG GAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGACGTGCCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAGA TCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCGACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAAGACCCGGACGACTA CGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGTACCTCGATCAGCTTCGCTGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAA CTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTCAAGCCGGTACCGCGCAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGGCGTGGAGAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCGGGTCGGCGCTT GCCCGGCAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAAG CCGAGCAACTGCTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGGT GGAGTTCCCCGCCGGTCGCGGCGACTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGAGTCAAGACTTCACCCTACATCGTTCGCGAA CAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACCG
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| Amino Acid Sequence |
>RNA helicase
MLYTGARSFLNHYEIAVLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRAPRADNESGAPRAVEKAEKGEKPAKPAAKEGR DAKPRSDKPRRERKPKPVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQT PPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDM GFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIE ERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEE LLGRKITCEMPPAELLKPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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