Strain | Pseudomonas aeruginosa BL17 genomic scaffold adggm-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATCGATCGCTACGTGTTTCCCCACGGCGAGCTGCCGCACCTGTCGCTGGCGGTGGCGCGGATGAGCGAAGCCGGGCTGGAAGTAGTCGACGTGGAAAGC CTGCGTCTGCACTACGCCCGGACCCTGGACTTTTGGAGCGCCAACCTGGAAGCCAGGCTGAAGGAGGCGGCTCGCCTGGTGCCCGAGGAAACCCTGCGGA TCTGGCGGCTGTACCTGGCCGGATGTGCCTACGGCTTCAAGCGCGGCTGGATCAACCTGCACCAGATCCTCGCCATTCGCCCCCACGAGGATGGCTCCCA CGAGCTGCCCTGGTCGCGGCGCGACCTGTACGCCTGAACGCCGGCGACCGGCTCCCTTGCGGAGCCGGTCGCGCAATCGGTCCTTGCGGATTGTCCTGCG TGGCGGGGCGGTCTAGTCTGCACGAAGTCCTGCGCGGTCGAGGGAAGCCGGGACGCTTCCGCGACAGCGCGACAACAACGATAAGAACAGGAGACTTCCC
|
|
DNA Sequence for Gene |
>Q071_06341
ATGTCGCTGAGCAGACGCTTCGGTCTTTTCACGCTTGCCGCAACGGTGACCTTCAGTACCGCGGTCTTCGCCGCGCCGACCTTCATCAATATCCTCACCG GCGGCACCAGCGGGGTCTATTACCCCATAGGGGTCGGCCTCTCGCAGATCTACGGGCACGATATCCAGGGCGCGAAAACCTCGGTGCAGGCCACCAAGGC CTCGGTCGAGAACCTCAACCTGCTGCAGGCCGGGCGTGGAGAACTGGCGCTGGCGCTGGGCGACTCGGTCGCCGACGCCTGGAACGGGGTCGCCGACGCC GGCTTCAAGGCGCCGTTGAAAAAGCTGCGGGCTATCGGCAATACCTATCCGAACTATATCCAGGTAGTGGCCAGCCAAGCCTCGGGCATCAAGACCCTGG CCGACCTGAAAGGCAAACGCATTTCGGTGGGCGCGCCCAAGAGCGGTACCGAGCTGAACGCCCGGGCGATCTTCAAGGCCGCCGGCCTGAGCTACGAGGA CATGGGCAAGGTGGAGTACCTGCCCTACGCCGAGTCGGTGGAGCTGATCAAGAACCGCCAGCTCGACGCTACGCTGCAATCCTCCGGCTTGGGCATGGCG GCCATCCGCGACCTGGCCTCGACCATGCCGATCACCTTCGTCGCGATCCCGGCGGACGTGGTGGCGAAGATCGACAGCCCGGCCTACCACGCCGCGAGCA TTCCCGCCGGCACCTACGACGGCCAGGAGCAGGACGTGCCGACGGTGGCGATCGACAATATCCTGGTCAGCCACTCCGGGGTCAGCGACGAGCTGGCCTA CCAGATGACCAAGCTGATGTTCGACAACCTGCCGCGCCTGGTCACCGCCCATGCTGCCGCCAAGGACATCGCCCTGGACAAGGCGGCGAAGAACCTGCCG ATTCCGCTGCATCCCGGCGCCGAGCGCTTCTACAAGGAGAAGGGCGTACTGCCCGAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCTCGTTTCTCCGTAGCCCCGGTCCGTGCGGCGGACCGGGTTCCCCGCGTTTCCGGCTGTAGGGAGTCGATGCATGAGCGATCATCAGAACGGGCTGCA CCTCGAGGCGGAAAACTGGCCGCGCGCGCTGTTCGCCGTGGCCCTGGCCTTTTCCGTGTTCCAGGTCGTCACCGCGGCCTTTCCCCTGATTTCCACCCAG GTCCTGCGGGCAATGCACGTCGGACTGCTGTTGCTGGTGGTGTACATCAGCTATCCCGCCTTCGGCATACGTCGCCCCTGGCAGCCGTTGGCCTGGTTGC TGGGCATGGCCGGCCTGGGCACGGCGGTCTACCAGTGGGTTTTCGAGGCCGACCTGATCCAGCGCTCCGGAGAGCTGACCCAGGCCGACATGGTCGTCGG CGTGGTGCTGATCGTCCTGGTCTTCGAGGCGGCGCGACGGGTGATGGGCATCGCCTTGCCGATCATCTGCGCGCTGTTTCTTGCCTATGGCCTGTTCGGC
|
|
Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MSLSRRFGLFTLAATVTFSTAVFAAPTFINILTGGTSGVYYPIGVGLSQIYGHDIQGAKTSVQATKASVENLNLLQAGRGELALALGDSVADAWNGVADA GFKAPLKKLRAIGNTYPNYIQVVASQASGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEYLPYAESVELIKNRQLDATLQSSGLGMA AIRDLASTMPITFVAIPADVVAKIDSPAYHAASIPAGTYDGQEQDVPTVAIDNILVSHSGVSDELAYQMTKLMFDNLPRLVTAHAAAKDIALDKAAKNLP IPLHPGAERFYKEKGVLPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|