Strain | Pseudomonas aeruginosa BL17 genomic scaffold adggm-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCACCACCACGGTCTTCTCGCCATCGCCGTATTTCACGGTCATGCGCCGGCCCTGGCTGACCACCAGGTTGCCGACCGTACCGTTGGTCATGGTCGAG GCGCTGCCATCGGCGTTCTCCCAGGGCCGGTGGCCTTCGCCGCTGCCGCGCAGGCTGGGGGCGAAGACATGCACCTCGAGGGCCTTCAGGGTGCCGTCGG GCTGCGGCACGGCGGCAGTGCCGATGAAGCTGTCGGGCTGGATGTCCTCCGGCTTCGCCAGCGACACGGCGCGGATCGCGGTCTTGTCGGTGAGCCTGAC CGTCAGTTGCTGGCCGTTGCGGGCCTTCAGTTGCAGGTGGTCGTCGGCGGCCTGCTGGATGGTGCCGCGCAGCGGCTGCAGCATGCCCGCAGGCGGTTGC GCGGCGAAGCTGGCGGCACTGGCCAGGAGCAGGCCGAAGAGCAGCGCGGGGGAAGCCTTGAGTCGAAGCATCGGTCGATCCTCGGTGGGGTTGAGCCTCG
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DNA Sequence for Gene |
>Q071_05586
ATGGTCGCCCCGCCGGCGGTACCCGGAGATGACTTTCGCATGACAAAAATGTCACCGAGTCCGCGCCGCGCGCTGGCTAGAATGGCGGCGAACGAGGGGG AACGAGACATGCGCATCCTGGTGATCGAAGACGATACGAAGACCGGCGAGTACCTGAAGAAGGGCCTCGGCGAGTCGGGCTATGCGGTCGACTGGTCGCA GCACGGCGCCGACGGTCTCTACCTGGCGCTGGAGAACCGCTACGACCTGGTGGTCCTCGACGTGATGCTGCCCGGCCTGGACGGTTGGCAGATCATGGAA GTGCTGCGCAAGAAGCACGATGTGCCGGTGCTCTTCCTCACCGCCCGCGACCAGCTGCAAGACCGTATCCGCGGCCTCGAACTGGGTGCCGACGACTACC TGGTGAAACCCTTCTCCTTCACCGAGTTGCTGCTGCGTATCCGTACCCTGCTGCGCCGCGGCGTGGTCCGCGAGGCAGAGCAGGTGCAACTGGCCGATCT GCAGCTGGACGTGCTGCGGCGCAAGGTCAGCCGCCAGGGGCAGGTGATCGCCCTGACCAACAAGGAGTTCGCCCTCCTGCACCTGCTGATGCGCCGCGAG GGCGAGGTGCTGTCGCGCACCCTGATCGCCTCGGAGGTCTGGGACATGAACTTCGACAGCGACACCAACGTCGTCGACGTGGCGATCAAGCGCCTGCGCG CCAAGGTCGACAATCCCTTCCCGAACAAGCTGATCCATACCGTGCGCGGCATCGGTTACGTCTGCGAGGAGCGCCCGTGCCCGCCCGCCGCTCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCTCTACGCGGCGCTGCTGTTCGCCGCGGTGGCGGCGCTGGTGGTCAGCGCGGTCGGCTTCTACCTGTACCGCTCGGTGGAAGAGGCGATGCTGCGGCG CAGCGACGTGATGGTCGCCGGCCGGGTCGAGCACTTCCGCAACCTGCTGCGCGACAACCTCACCCTGGCCGAGCTGAAGGCGCGCCCGCGTCTGTTCGAG AACATGCTCGGCAACGAGCAGGACATCCTGCTCCTCGGTCAGCCCGGCGAGGCGCCGATCGTCGCGGTCAACCCGCGCCACGAACGCCTGCCGTCGCTAC GGGTGGTCGCCGCCGGCCAGGCGTTGAATCCGTCCGTCGTGCACGCCGCGCTGACCCACGACGGCATCCCGATGCGCGTGCTCGCCGCCGAGGTCCTGGT CGGCGGCCGCGAGCCGTTGCAGATCACCGCCGCGCACCTGCTGCTGGGCGAGACGCGGATGCTCGCCCAGTACCGCGACCGGGTCATCGCCGCCGTGCTG
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Amino Acid Sequence |
>heavy metal response regulator
MVAPPAVPGDDFRMTKMSPSPRRALARMAANEGERDMRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENRYDLVVLDVMLPGLDGWQIME VLRKKHDVPVLFLTARDQLQDRIRGLELGADDYLVKPFSFTELLLRIRTLLRRGVVREAEQVQLADLQLDVLRRKVSRQGQVIALTNKEFALLHLLMRRE GEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYVCEERPCPPAAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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