Pseudomonas aeruginosa BL17, Q071_04209

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.20 PAS domain - - 544 596 8.8E-10
CDD cd00130 PAS IPR000014 PAS domain 309 412 7.54549E-9
SMART SM00091 pas_2 IPR000014 PAS domain 427 495 5.2
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 435 544 5.23E-17
PANTHER PTHR43304 PHYTOCHROME-LIKE PROTEIN CPH1 - - 424 562 2.0E-32
Gene3D G3DSA:2.10.70.100 - - - 498 543 5.9E-13
CDD cd00130 PAS IPR000014 PAS domain 439 540 1.99732E-8
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 299 421 5.9E-26
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 307 418 2.97E-21
SMART SM00086 pac_2 IPR001610 PAC motif 373 415 1.3E-7
Coils Coil Coil - - 415 435 -
Gene3D G3DSA:3.30.450.20 PAS domain - - 297 428 8.4E-24
Pfam PF08447 PAS fold IPR013655 PAS fold-3 324 406 4.1E-11
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 539 590 5.58E-10
SMART SM00086 pac_2 IPR001610 PAC motif 501 543 2.3E-8
Pfam PF08447 PAS fold IPR013655 PAS fold-3 450 537 2.1E-17
Pfam PF05231 MASE1 IPR007895 MASE1 15 289 7.5E-17
SMART SM00091 pas_2 IPR000014 PAS domain 300 366 7.2E-6
Gene3D G3DSA:3.30.450.20 PAS domain - - 429 496 3.8E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.