Pseudomonas aeruginosa BL17, Q071_03958
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL17 genomic scaffold adggm-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGAACTGGAAAAGTGGCTATGTCGCCGGGTTCGTGCCCGGCAGGCCTGACGCCGCGAGGTCGCCCCTTTGGCCACGGCGCTGTGCCTTTGCCCGTGCGC CGCGCACCGACGACTGCGCCTCGGATCGCCCGGCCGAGAGCGGTCGCACGCGTGGCGAGGGGCCGACAGTGAACCCGGGGACCAGGCGTGACTGGGTATT CAGTTCGCATAAAATGTGATCTAGATCACATTTAAACGTTTGCTTACCCTCTAGGACGGGTATCGTACTAGGTGCATCAAACGCCGCGGTCTATTGTTAA GTGGGACTGAAATGTGCCTTTCCGGCACAACGCCAACTCTATAGAGTGGGCTGACTGGACATCTTCAGGGGTCGTCGGGCACGGGCGCATGCGCCTCGGC AGGAAGCCGGGATTCTCGGACTGCCGTACAACGTGCCGGATATCGGGTGCCGAATCCATATTTGGCTGATTGGTTAATAGTTTAAGAAGAACGTAGCGCT
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| DNA Sequence for Gene |
>Q071_03958
ATGGCCTTGGTTGACGGTTTTCTTGAGCTGGAACGCTCAAGTGGAAAATTGGAGTGGAGCGCCATCCTGCAGAAGATGGCGAGCGACCTTGGATTCTCGA AGATCCTCTTCGGCCTGTTGCCTAAGGACAGCCAGGACTACGAGAACGCCTTCATCGTCGGCAACTACCCGGCCGCCTGGCGCGAGCATTACGACCGGGC TGGCTACGCGCGGGTCGACCCGACGGTCAGTCACTGTACCCAGAGCGTACTGCCGATTTTCTGGGAACCGTCCATCTACCAGACGCGAAAGCAGCACGAG TTCTTCGAGGAAGACTCGGCCGCCGGCCTGGTGTATGGGCTGACCATGCCGCTGCATGGTGCGCGCGGCGAACTCGGCGCGCTGAGCCTCAGCGTGGAAG CGGAAAACCGGGCCGAGGCCAACCGTTTCATGGAGTCGGTCCTGCCGACCCTGTGGATGCTCAAGGACTACGCACTGCAGAGCGGTGCCGGACTGGCCTT CGAACATCCGGTCAGCAAACCGGTGGTTCTGACCAGCCGGGAGAAGGAAGTGTTGCAGTGGTGCGCCATCGGCAAGACCAGTTGGGAGATATCGGTTATC TGCAACTGCTCGGAAGCCAATGTGAACTTCCATATGGGAAACATTCGGCGGAAGTTCGGTGTGACCTCCCGCCGCGTAGCGGCCATTATGGCCGTTAATT TGGGTCTTATTACTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCTTGCCTCTCAGGTCGGCGAGCTGGCGATCGGTAATTTGCCCTTCTATATAGAAATGCAAAAGCAGATATATAGGGAAGGGCAGGTTCTCGCCATTCTC GAAACGACTGCCGCAGGATTGGCTTATCCCGAAGCGGCTCCAGAAAGTTTCCTGGCTTTCCCGTCGGGCGGTGCGGGTGGCCTTTGCCCGGAAGGCCATG TTTTGGGGCTGTGTTCTCTCGTGTGAAGCCATTGCTCTGATCTTTTCGGACGTTTCTTCGAGCCTAGCAAGGGTCCGGGTTCACCGAAATCTATCTCATT TGCTAGTTATAAAATTATGAAATTTGCATAAATTCTTCAGCTTCCTATTTGGAGGAAGTGAAGATGATCGTACAAATTGGTCGGCGCGAAGAGTTCGATA AAAAACTGCTGGGCGAGATGCACAAGTTGCGTGCTCAAGTGTTCAAGGAGCGCAAAGGCTGGGACGTTAGTGTCATCGACGAGATGGAAATCGATGGTTA
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| Amino Acid Sequence |
>transcriptional activator protein lasR
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHE FFEEDSAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVI CNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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