Strain | Pseudomonas aeruginosa BL17 genomic scaffold adggm-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCCAGCTCCAACAAACCATCCGCCATGGCCGCCAGGGCCAGATGCCGGCCCAGGAGCCCTACCTGGGCAAGGAAAAGGTGCACATCCTGGCCGCCTAC ATCTACAACCTGTCGCACAACCAGGGCAGCAACTGACCCCTCCCCCCACCCGCGCCCTCCCGGGCGCGGGTCCTTCCCCCGGTCTCAGACCTTAGTCCCA GGCGGCGCGACGAAGTGTCGCACCAGCGGACGCCTTTCCTACCCTTCCTTTTCAATCGCGTCTAAGCTGCTCTGCATTCGTCCCTCTCCGGCAGAGCGAC GGGACACCTAACTTCACCGGCCGAACCCACTCGTCCGGATAGCGCCAGAAAGCCATACGGCCGCCTTGGAAAGCGCTCTGAAGCAGGCATCAAACTGGCG TCGCCCCTGGCCTGGCGCGTTGCAATGCCCACCCGCTTTCTCCATACTTGCCGCCGATTTTTTGTCCCTAAAAAAGTCCATTAACCGTGGAACCCCTAGC
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DNA Sequence for Gene |
>Q071_03833
ATGAGCACAGCAATCAGTCAGACTGCTTATAACTATAAGGTGGTCCGCCAGTTCGCCGTTATGACGGTGGTCTGGGGGGTCATTGGAATGGGTCTCGGTG TCCTGATCGCCGCCCAACTGGTATGGCCCGAATTGAACTTCGACCTGCCGTGGACGAGCTTCGGCCGCCTTCGCCCCCTGCACACCAACGCGGTGATCTT CGCCTTCGGTGGGTGCGCCCTCTTCGCCACCTCGTACTACGTGGTGCAACGTACCTCGCAAGCCCGACTGATTTCAGACACGCTGGCGGCCTTCACCTTC TGGGGTTGGCAGGCCGTGATCGTGGGCGCCGTGCTGACCCTGCCGCAGGGTTTCACCACCTCCAAGGAATACGCCGAACTGGAATGGCCGCTGGCCATCC TCCTGGCGATCGTCTGGATCACCTACGCGATCGTGTTCTTCGGCACCATCGTCAAGCGCAAGGTCAAGCACATCTATGTGGGCAACTGGTTCTACGGTGC CTTCATCCTGGTGACGGCGATGCTGCACATCGTCAACCACATGTCGCTGCCGGTGAGCTGGTTCAAGTCCTACTCCGCCTACTCCGGCGCCACCGATGCG ATGGTCCAGTGGTGGTACGGCCACAACGCCGTGGGCTTCTTCCTGACCACCGGCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGGCCGAGCGTC CGGTCTATTCCTATCGCCTGTCCATCGTCCACTTCTGGGCGCTGATCTCCCTGTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCGGA CTGGGCGCAGTCGCTGGGCATGGTGATGTCGCTGATCCTCCTGGCACCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCCGGCGCCTGGCAT AAGCTGCGCACCGACCCGATCCTGCGCTTCCTGGTGGTCTCCCTGGCCTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGATCAAGACCGTCA ACGCCCTCTCCCACTACACCGACTGGACCATCGGCCACGTGCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCCATCGGCTCGCTCTACCACCTGAT CCCGAAAGTCTTCGGTCGCCCGCAGATGCACAGCATCGGCCTGATCAACGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTGTACATCGCCTCGATG TGGGTCAACGGCATCACCCAGGGTCTGATGTGGCGCGCGGTCAACGAGGACGGCACCCTGACCTACTCCTTCGTTGAAGCACTGGTCGCAAGCCACCCGG GCTTCATCGTGCGCATGATCGGCGGTGGTTTCTTCCTCACCGGCATGCTGCTGATGGCCTACAACACCTGGCGCACCGTGCGTGCTGCCAAGCCGGCCGA ATACGAAGCCGCCGCGCAGATCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCCCGACGTAAATGAAGAACCACGAAATACTCGAGAAGAACGTCGGCCTGCTGGCCATCTTCATGGTGATCGCCGTCAGCATCGGCGGCCTGACCCA GATCGTGCCGCTGTTCTTCCAGGACGTGACCAATACCCCGGTCGAAGGCATGAAGCCGCGTACCGCCCTGGAACTGGAAGGTCGCGACATCTACATCCGC GAAGGCTGCGTCGGCTGCCACTCGCAGATGGTCCGCCCGTTCCGTGCCGAGACCGAACGCTACGGCCATTACTCGGTCGCCGGTGAAAGCGTCTGGGACC ACCCGTTCCTGTGGGGTTCCAAGCGTACCGGCCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCG CAACGTGGTGCCCGAGTCGAAGATGCCTGCCTACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAG
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Amino Acid Sequence |
>cytochrome oxidase subunit I
MSTAISQTAYNYKVVRQFAVMTVVWGVIGMGLGVLIAAQLVWPELNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYVVQRTSQARLISDTLAAFTF WGWQAVIVGAVLTLPQGFTTSKEYAELEWPLAILLAIVWITYAIVFFGTIVKRKVKHIYVGNWFYGAFILVTAMLHIVNHMSLPVSWFKSYSAYSGATDA MVQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPVYSYRLSIVHFWALISLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWH KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGSLYHLIPKVFGRPQMHSIGLINAHFWLATIGTVLYIASM WVNGITQGLMWRAVNEDGTLTYSFVEALVASHPGFIVRMIGGGFFLTGMLLMAYNTWRTVRAAKPAEYEAAAQIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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