Strain | Pseudomonas aeruginosa BL18 genomic scaffold adgey-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATTGAATATAAAGGTTTTTAATAATTTGGCACGGGCCTTGCTGAAGTGTTGGCGACGAAAGCCACACCGGCAAACAGGTTCGCAGCCATGAGCATCAGTT TCGACAGAGCACTCGGTATCCACCAGCAGGCCCTCAGCTTCCGCGCCCAGCGCGCCGAAGTGCTGGCCAACAACCTGGCCAACGCCGATACCCCGAACTA CAAGGCTCGCGACCTGGACTTCGCCGCGGTTCTCGCCGAGCAGAAGGACAAGGCCGCCAAGGGTACCTTCGCCACCCGCACCACCAACGAGCGGCATATC GCCGCCGAAGGTTTCGGCATGGGCGAGGGCAGCCTGCAGTACCGCATCCCGGTCCAGCCGTCGATCGACCAGAACACTGTCGACGCCCAGATCGAGCAGG CCAACTACGCCGAGAACGCCATGCACTTCCAGGCGTCCTTCACCTTCCTCAACAGCAAATTCAAAGGGCTGGTCAGCGCCCTGCGTGGAGAGTAACCGCC
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DNA Sequence for Gene |
>Q072_03417
ATGTCCCTCGCCAGTGTCTTCAACATTGCCGGTAGCGGCATGAGCGCCCAGAGCACCCGCCTGAACACCGTGGCCAGCAACATCGCCAACGCCGAGACGG TTTCCTCCAGCGTCGACAAGACCTACCGCGCCCGCCATCCGGTGTTCTCCACCATGTTCCAGCAGGCCCAGGGCGACAGCGGCTCGCTGTTCGCCGACCA GGACAGCTCCGGCGCCGGCGTGCAGGTGCTGGGCATCGTCGAGGACCAGAGTTCGCTGATGCCGCGCTACGAGCCGAACCATCCGGCCGCGGATGCCAAC GGCTACGTGTATTACCCCAATGTGAACGTGGTCGAGGAAATGGCCGACATGATTTCCGCCAGCCGTGCCTTCCAGACCAACGCGGAAATGATGAATACCG CCAAACAGATGATGCAGAAGGTCCTGACCCTGGGTCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGAGTAGAGCATGAGCATCGATAACGTCAGCGGCACTAGCAGCAACACCGGCAACGTCAACGGCAGCAATCGCGCCGCCGGCAGCGGCGCCACCGAGA CCGGGCAGAGCGTCAAGGGCAGCAGCAACCTGGGCAAGGACGAATTCCTCAAGCTGCTGGTGGCCCAGTTGAAGAACCAGGACCCGATGTCGCCGCAGCA GAACGGCGAGTTCATCGCCCAACTGGCCCAGTTCAGCACCGTGGAAGGCGTGCAGTCGCTGAACAAGAGCATGGAGAGCATTCTCTCCAACTACCAGTCG TCGCAGGCCCTGCAAGCCTCGTCGCTGGTGGGGCGCAAGGTCATCGTGGCGACCGACAAGTCGGTGGTGGACACCAAGGACACCTTCAAGGCGTCCCTCA ACCTGCCGGTTTCCAGCAGCAACGTCTGGGTCAACGTCTACGACGACAAGGGCACCGTGGTCAATCGCATCAACCTCGGCCAGCAGGCTGCCGGCAGCGT
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Amino Acid Sequence |
>flagellar basal body rod protein FlgC
MSLASVFNIAGSGMSAQSTRLNTVASNIANAETVSSSVDKTYRARHPVFSTMFQQAQGDSGSLFADQDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADAN GYVYYPNVNVVEEMADMISASRAFQTNAEMMNTAKQMMQKVLTLGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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